Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2o12
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p pro...    76   6e-14
BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p pro...    74   2e-13
BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p pro...    74   2e-13
AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB...    74   2e-13
AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC...    73   5e-13
BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p pro...    61   2e-09
BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p pro...    61   2e-09
AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA...    61   2e-09

>BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p
           protein.
          Length = 142

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = +2

Query: 320 KMPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRT 499
           KM  +  KY+  K+E+ D+Y   +GV  + RKM +  SP +E++++GDT T+  +S  +T
Sbjct: 12  KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71

Query: 500 VEHKFKLGEEY-EEKMPNSIIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIV 673
               FKLG E+ EE +    +KS+ T+  N    E K   P T  +     +FTD E I 
Sbjct: 72  SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELIT 126

Query: 674 TLTHEN 691
           TLT  N
Sbjct: 127 TLTIGN 132


>BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p
           protein.
          Length = 130

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +2

Query: 323 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 502
           M  +  KY+  K+E+ D+Y   +GV  + RKM +  SP +E++++GDT T+  +S  +T 
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 503 EHKFKLGEEY-EEKMPNSIIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVT 676
              FKLG E+ EE +    +KS+ T+  N    E K   P T  +     +FTD E I T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITT 115

Query: 677 LTHEN 691
           LT  N
Sbjct: 116 LTIGN 120


>BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p
           protein.
          Length = 130

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +2

Query: 323 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 502
           M  +  KY+  K+E+ D+Y   +GV  + RKM +  SP +E++++GDT T+  +S  +T 
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 503 EHKFKLGEEY-EEKMPNSIIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVT 676
              FKLG E+ EE +    +KS+ T+  N    E K   P T  +     +FTD E I T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITT 115

Query: 677 LTHEN 691
           LT  N
Sbjct: 116 LTIGN 120


>AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB,
           isoform B protein.
          Length = 130

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +2

Query: 323 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 502
           M  +  KY+  K+E+ D+Y   +GV  + RKM +  SP +E++++GDT T+  +S  +T 
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 503 EHKFKLGEEY-EEKMPNSIIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVT 676
              FKLG E+ EE +    +KS+ T+  N    E K   P T  +     +FTD E I T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITT 115

Query: 677 LTHEN 691
           LT  N
Sbjct: 116 LTIGN 120


>AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC,
           isoform C protein.
          Length = 157

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
 Frame = +2

Query: 323 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 502
           M  +  KY+  K+E+ D+Y   +GV  + RKM +  SP +E++++GDT T+  +S  +T 
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 503 EHKFKLGEEY-EEKMPNSIIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVT 676
              FKLG E+ EE +    +KS+ T+  N    E K   P T  +     +FTD E I  
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITL 115

Query: 677 LTHENASVSGKRYFR 721
           + H   S  G    R
Sbjct: 116 IPHLTPSQHGSLRLR 130


>BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p
           protein.
          Length = 117

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = +2

Query: 377 YFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEY-EEKMPNS 553
           + S+ GV  + RKM +  SP +E++++GDT T+  +S  +T    FKLG E+ EE +   
Sbjct: 6   HHSSFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGR 65

Query: 554 IIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHEN 691
            +KS+ T+  N    E K   P T  +     +FTD E I TLT  N
Sbjct: 66  NVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITTLTIGN 107


>BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p
           protein.
          Length = 117

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = +2

Query: 377 YFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEY-EEKMPNS 553
           + S+ GV  + RKM +  SP +E++++GDT T+  +S  +T    FKLG E+ EE +   
Sbjct: 6   HHSSFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGR 65

Query: 554 IIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHEN 691
            +KS+ T+  N    E K   P T  +     +FTD E I TLT  N
Sbjct: 66  NVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITTLTIGN 107


>AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA,
           isoform A protein.
          Length = 117

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = +2

Query: 377 YFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEY-EEKMPNS 553
           + S+ GV  + RKM +  SP +E++++GDT T+  +S  +T    FKLG E+ EE +   
Sbjct: 6   HHSSFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGR 65

Query: 554 IIKSVTTIT-NDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHEN 691
            +KS+ T+  N    E K   P T  +     +FTD E I TLT  N
Sbjct: 66  NVKSIITLDGNKLTQEQKGDKPTTIVR-----EFTDNELITTLTIGN 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,643,553
Number of Sequences: 53049
Number of extensions: 548945
Number of successful extensions: 1013
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)