Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2o11
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 373 ELIIMAADAEPLEIVLHIPILCEDKNVPYVF 465
           +LI +   AE ++ +L   + C D+  PY+F
Sbjct: 93  KLIRIFLAAESIDDLLSNAVFCRDRVNPYLF 123


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 250 YPLADAALTAKILNLVQQATNYKQLRKGANEATKTLNRG 366
           YP ++      I NL Q   NYK        A  T ++G
Sbjct: 353 YPSSNLMPLNNIQNLSQSGINYKDTNDNNVSAVTTQHQG 391


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 658 IKILYSTQNNFLTRLFILKLIVFR 587
           +K  + T NN L  L+  KLIV +
Sbjct: 197 LKTRFKTINNILENLWAKKLIVVK 220



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = +3

Query: 84  CDLSVELWQIPKFSLPYVKII 146
           C++ +E+W IP+ ++  + ++
Sbjct: 433 CNVLMEMWNIPRENIDPIPLV 453


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 517 ISCSITINEGSQLKPQIQTIQQEIERL 597
           I C+    E   LK    T+++E+E+L
Sbjct: 165 IRCAFLERENCHLKFVTDTLKKELEKL 191


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 454 PYVFVRSKQALGRACGVS 507
           PY    +K+ L R CG++
Sbjct: 256 PYPSEEAKEELARKCGIT 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,557
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)