Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2o02
(763 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy ch... 33 1.5
BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein. 32 1.9
AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy ch... 32 2.6
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta... 31 4.5
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4... 31 4.5
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4... 31 4.5
AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like ... 31 4.5
AL365181-9|CAI13053.1| 370|Homo sapiens G patch domain containi... 31 5.9
>AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 41 MMEPRDPDSLE-IRHNGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYDPTLLS 199
+++P + SL + H G FSN F W+ P G + + I P + Y+P+L S
Sbjct: 11 LLKPSETLSLTCVVHGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYNPSLKS 65
>BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 69 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 248
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASSCPPSIT 131
Query: 249 DFLL 260
+ ++
Sbjct: 132 NSMV 135
>AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 38 LMMEPRDPDSLE-IRHNGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYDPTLLS 199
++ +P + SL + H G FSN F W+ P G + + I P + Y+P+L S
Sbjct: 10 VLAKPSETLSLTCVVHGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYNPSLKS 65
>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
containing 4 protein.
Length = 1048
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 17 DYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 178
DY A L E D + + HNG+F N + ENG + + KH SK
Sbjct: 209 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 261
>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 17 DYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 178
DY A L E D + + HNG+F N + ENG + + KH SK
Sbjct: 210 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 262
>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 17 DYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 178
DY A L E D + + HNG+F N + ENG + + KH SK
Sbjct: 210 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 262
>AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
TENSIN. ).
Length = 480
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 69 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 248
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 131
Query: 249 DFLL 260
+ ++
Sbjct: 132 NSMV 135
>AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like
protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 69 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 248
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 307 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 366
Query: 249 DFLL 260
+ ++
Sbjct: 367 NSMV 370
>AL365181-9|CAI13053.1| 370|Homo sapiens G patch domain containing
4 protein.
Length = 370
Score = 30.7 bits (66), Expect = 5.9
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -3
Query: 755 QRPHHAE--IGQTQSSHCRHEFVMVSDGTKQTERDRMEFGLHTQTSWEDDLYCRKLADIS 582
+ P HAE I +++ RH+ VSD + T + + TS +L R+ + S
Sbjct: 228 KHPEHAEQNIRKSKKKKRRHQEGKVSDEREGTTKGNEKEDA-AGTSGLGELNSREQTNQS 286
Query: 581 *-SGQKLRQWHHASRLMSGMLSKGRK 507
G+K ++WHH M G+L +G K
Sbjct: 287 LRKGKKKKRWHHEEEKM-GVLEEGGK 311
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,176,284
Number of Sequences: 237096
Number of extensions: 2917573
Number of successful extensions: 7307
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7307
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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