Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n20
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-593|AAF45915.1|  788|Drosophila melanogaster CG6379-PA ...    61   2e-09
AY071576-1|AAL49198.1|  788|Drosophila melanogaster RE63452p pro...    59   6e-09
BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p pro...    42   7e-04
AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA...    42   7e-04
AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p pro...    35   0.10 
AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7 p...    35   0.10 
AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.    35   0.10 
AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA...    35   0.10 
AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA...    30   3.9  
AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p pro...    29   9.0  
AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p pro...    29   9.0  
AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA...    29   9.0  
AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-P...    29   9.0  

>AE014298-593|AAF45915.1|  788|Drosophila melanogaster CG6379-PA
           protein.
          Length = 788

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
 Frame = +1

Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGPDKSGD 501
           F D+C GPG F+ Y +       K +G TL   N   + K      ++F T  G  + G+
Sbjct: 211 FTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGN 270

Query: 502 VFDKN----VVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLR 669
           +FD++    +   I +         +ADG   V G++N QE L+  L +C+    L  LR
Sbjct: 271 IFDESNQDSLNEYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILR 330

Query: 670 PGGNCVLKSF 699
           P G+ V K F
Sbjct: 331 PNGSFVCKVF 340


>AY071576-1|AAL49198.1|  788|Drosophila melanogaster RE63452p
           protein.
          Length = 788

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
 Frame = +1

Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGPDKSGD 501
           F D+C GPG F+ Y +       K  G TL   N   + K      ++F T  G  + G+
Sbjct: 211 FTDMCAGPGGFSEYVLYRKSWEAKGLGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGN 270

Query: 502 VFDKN----VVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICLR 669
           +FD++    +   I +         +ADG   V G++N QE L+  L +C+    L  LR
Sbjct: 271 IFDESNQDSLNEYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILR 330

Query: 670 PGGNCVLKSF 699
           P G+ V K F
Sbjct: 331 PNGSFVCKVF 340


>BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p
           protein.
          Length = 302

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 3/150 (2%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
           R R   KLL +D+ + +   V   +DLC  PG ++          K Y    T++     
Sbjct: 22  RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSR-----KLYDTCETDDEKSAV 76

Query: 439 KPTVCKRKNFTTITGP-DKSGDVFDKNVVFEISIKCGN--ACDLVLADGSVDVNGRENEQ 609
           K      +    I G     GD+  ++    I    G      LV+ DG+ DV G     
Sbjct: 77  KIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMD 136

Query: 610 ERLNFDLIMCETQLILICLRPGGNCVLKSF 699
           E +   L++    +    L  GG  V K F
Sbjct: 137 EYMQHQLLVAALSIATCVLETGGTFVAKIF 166


>AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA
           protein.
          Length = 302

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 3/150 (2%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
           R R   KLL +D+ + +   V   +DLC  PG ++          K Y    T++     
Sbjct: 22  RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSR-----KLYDTCETDDEKSAV 76

Query: 439 KPTVCKRKNFTTITGP-DKSGDVFDKNVVFEISIKCGN--ACDLVLADGSVDVNGRENEQ 609
           K      +    I G     GD+  ++    I    G      LV+ DG+ DV G     
Sbjct: 77  KIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMD 136

Query: 610 ERLNFDLIMCETQLILICLRPGGNCVLKSF 699
           E +   L++    +    L  GG  V K F
Sbjct: 137 EYMQHQLLVAALSIATCVLETGGTFVAKIF 166


>AY050236-1|AAK84935.1|  700|Drosophila melanogaster SD02116p
           protein.
          Length = 700

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 487 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
           D +G++ D     ++V    ++     DLV ADGS+D   + + QE +   L   E    
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261

Query: 655 LICLRPGGNCVLKSF 699
           L  L  GGN ++K F
Sbjct: 262 LRILSSGGNFLVKMF 276


>AL035311-3|CAA22952.1|  700|Drosophila melanogaster EG:52C10.7
           protein.
          Length = 700

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 487 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
           D +G++ D     ++V    ++     DLV ADGS+D   + + QE +   L   E    
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261

Query: 655 LICLRPGGNCVLKSF 699
           L  L  GGN ++K F
Sbjct: 262 LRILSSGGNFLVKMF 276


>AF117649-1|AAD22030.1|  700|Drosophila melanogaster Adrift protein.
          Length = 700

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 487 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
           D +G++ D     ++V    ++     DLV ADGS+D   + + QE +   L   E    
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261

Query: 655 LICLRPGGNCVLKSF 699
           L  L  GGN ++K F
Sbjct: 262 LRILSSGGNFLVKMF 276


>AE013599-2565|AAF57788.1|  700|Drosophila melanogaster CG5032-PA
           protein.
          Length = 700

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 487 DKSGDVFD----KNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
           D +G++ D     ++V    ++     DLV ADGS+D   + + QE +   L   E    
Sbjct: 202 DLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSA 261

Query: 655 LICLRPGGNCVLKSF 699
           L  L  GGN ++K F
Sbjct: 262 LRILSSGGNFLVKMF 276


>AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA
           protein.
          Length = 1802

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = -1

Query: 392 QSGFNDMV*LANSPGPPHRSKNVSTCRQT 306
           Q G+N  V LA SP PPHR K VS   QT
Sbjct: 171 QLGYNTQV-LALSPRPPHRIKVVSQGAQT 198


>AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 277 KLLEIDKKFHVCRHVDTFLDLCGGPGEF 360
           KLLEID K+ + R  DT L+    PG +
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPGSW 93


>AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p
           protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 354
           R R   KL+++++KF   +     LDLC  PG
Sbjct: 25  RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA
           protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 354
           R R   KL+++++KF   +     LDLC  PG
Sbjct: 25  RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-PA
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 277 KLLEIDKKFHVCRHVDTFLDLCGGPGEF 360
           KLLEID K+ + R  DT L+    PG +
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPGSW 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,715,823
Number of Sequences: 53049
Number of extensions: 686788
Number of successful extensions: 1800
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)