Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n14
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.4  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.6  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.6  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 607 ADFHDAVP-GYSGAHASPPSTETV 539
           +++H   P GY+G+  +PPS + V
Sbjct: 40  SNYHYEDPYGYTGSEETPPSPQEV 63


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 607 ADFHDAVP-GYSGAHASPPSTETV 539
           +++H   P GY+G+  +PPS + V
Sbjct: 40  SNYHYEDPYGYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 607 ADFHDAVP-GYSGAHASPPSTETV 539
           +++H   P GY+G+  +PPS + V
Sbjct: 40  SNYHYEDPYGYTGSEETPPSPQEV 63


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 674 LQCSNNPVRHA 642
           +QCSN+P+R A
Sbjct: 60  IQCSNSPLRKA 70


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  QFSLIVN*NHFLRSFVNSVKYN*ASSVLFISF 167
           +F L+   N FLR    +VKY+  +S + I F
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYF 410


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  QFSLIVN*NHFLRSFVNSVKYN*ASSVLFISF 167
           +F L+   N FLR    +VKY+  +S + I F
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYF 410


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  QFSLIVN*NHFLRSFVNSVKYN*ASSVLFISF 167
           +F L+   N FLR    +VKY+  +S + I F
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYF 410


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  QFSLIVN*NHFLRSFVNSVKYN*ASSVLFISF 167
           +F L+   N FLR    +VKY+  +S + I F
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYF 410


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  QFSLIVN*NHFLRSFVNSVKYN*ASSVLFISF 167
           +F L+   N FLR    +VKY+  +S + I F
Sbjct: 378 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYF 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,200
Number of Sequences: 336
Number of extensions: 3848
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)