Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n10
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    27   0.18 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.18 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.31 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 569 LMVVGESGLGKSTLINSL 622
           L ++G SG GK+TL+N+L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 569 LMVVGESGLGKSTLINSL 622
           L ++G SG GK+TL+N+L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 316 ASEYSAPTNTCPASTNICTSRT--STDTPQEYREYYEESRTPTGRAETRLT*NRKTKNQR 489
           AS  S+ ++T  A TN   S++  S++ PQ Y       R   G++      N +TK QR
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWM---KRVHLGQSTVNA--NGETKRQR 224

Query: 490 TRWLRR 507
           TR +RR
Sbjct: 225 TRAIRR 230


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 312 PSLRVQRPHQHLPRQYQY 365
           P L+  +P QH PR++ Y
Sbjct: 96  PKLQEPQPSQHCPRKHGY 113


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
 Frame = +2

Query: 431  HPPVAP---KPDLPKIEKPKT 484
            HPP+ P   KP LP+  KP++
Sbjct: 1375 HPPIPPTSEKPPLPEELKPQS 1395


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 532 VQESCEEGLRIHVDGRR*IRLGQVDTNKLALL 627
           +QE   E LR +VD RR  + G +    L++L
Sbjct: 480 IQEIYLEALRAYVDNRRKPKPGTIFAKLLSVL 511


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 624 KSEFISVDLPKPDSPTTINVNSKPFFTAFL 535
           +++FI+V   + +  T + +   PF  AFL
Sbjct: 175 ETQFIAVTAYQNEEVTALKIKYNPFAKAFL 204


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 281 SWRSHWLLRG 252
           +W+SHWL +G
Sbjct: 361 AWQSHWLNKG 370


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 579 TTINVNSKPFFTAFLYTWFG 520
           T    N+K F   FL++W G
Sbjct: 93  TDTKQNTKSFIYHFLHSWLG 112


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 579 TTINVNSKPFFTAFLYTWFG 520
           T    N+K F   FL++W G
Sbjct: 93  TDTKQNTKSFIYHFLHSWLG 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,524
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)