Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2n10
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 73 5e-14
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 66 3e-12
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 55 8e-09
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 40 4e-04
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 36 0.007
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 34 0.015
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 34 0.020
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 28 1.3
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.3
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 27 1.8
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 1.8
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 26 4.1
SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase |Schi... 26 4.1
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 26 5.4
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 7.1
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 25 7.1
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 7.1
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 25 9.4
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 25 9.4
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 9.4
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 25 9.4
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 72.5 bits (170), Expect = 5e-14
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = +2
Query: 485 KELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVY 640
++L+GYVGFA+LPNQ +R+ V++GF F ++V+GESG GKSTL+N+L +VY
Sbjct: 70 RQLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVY 121
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 66.5 bits (155), Expect = 3e-12
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 467 IEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYD 643
+E P L+ YVGF ++ +Q+ RK +++GF+F +MVVG SG GKSTLIN+LF + D
Sbjct: 1 MEVPSAVTLNNYVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMD 59
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 55.2 bits (127), Expect = 8e-09
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 485 KELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEV 637
+E +VG A+LPNQ ++ + G FTLM+ GESGLGK+T N+LF T +
Sbjct: 3 EEETNFVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTI 53
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 503 VGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINS 619
+G + +Q Y + + G + L+VVGES LGK+T +NS
Sbjct: 99 IGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNS 137
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 35.5 bits (78), Expect = 0.007
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 536 RKAVKKGFEFTLMVVGESGLGKSTLINSL 622
+K+ KKG LMVVG+ GLG++ IN+L
Sbjct: 44 KKSSKKGIPLNLMVVGDVGLGRTAFINTL 72
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 34.3 bits (75), Expect = 0.015
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 428 EHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFT------LMVVGES 589
E P V KP+ P ++ + K + +V FA P RK V F + +VGES
Sbjct: 564 EKPTVVEKPNAPDLKVTQGKVIFSHVSFAYDP----RKPVLSDINFVAQPGKVIALVGES 619
Query: 590 GLGKSTLINSL 622
G GKST++ L
Sbjct: 620 GGGKSTIMRIL 630
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.020
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 482 TKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSLFLTEV 637
T+ L + +LP++ +K T+M+ G SG GK+T N+LF T +
Sbjct: 4 TENLQLLLNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSL 55
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 542 AVKKGFEFTLMVVGESGLGKSTLINSLFLTEVYDKD 649
A KK ++++GESG+GK++++N ++ + KD
Sbjct: 2 AGKKKHLLKVIILGESGVGKTSIMNQ-YVNRKFSKD 36
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 431 HPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTL 610
H P+ + K + + KE ++ + YR +++ +++V GESG GK+
Sbjct: 134 HLPIYGDDVVRKYQSKQFKETKPHI--FGTADAAYRSLLERRINQSILVTGESGAGKTET 191
Query: 611 INSL--FLTEVYD 643
+ +LT V D
Sbjct: 192 TKKVIQYLTSVTD 204
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 554 GFEFTLM-VVGESGLGKSTLINSLFLT 631
GF + ++ V+G GKSTL+N+LF T
Sbjct: 36 GFNYHVVAVLGSQSTGKSTLLNNLFGT 62
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 560 EFTLMVVGESGLGKSTLINSLFLTEVYDK 646
E+ L+VVG+ G+GKS L L + D+
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDE 36
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 515 NLPNQVYRK-AVKKGFEFTLMVVGESGLGKSTLIN 616
NL + +YR + + + +VG++G GKSTL+N
Sbjct: 400 NLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLN 434
>SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 324 VQRPHQHLPRQYQYLHLPHQYRHPSGVQRIL*RKP 428
+Q PH+ LP Q+LH +HP GV ++ KP
Sbjct: 116 IQEPHEPLPTYEQFLH--ELTKHP-GVNLLVDIKP 147
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 563 FTLMVVGESGLGKSTLI 613
F L+++G+SG+GKS L+
Sbjct: 9 FKLLLIGDSGVGKSCLL 25
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 575 VVGESGLGKSTLINSL 622
++GESG GK+TL+N L
Sbjct: 916 LMGESGAGKTTLLNVL 931
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +1
Query: 316 ASEYSAPTNTCPA--------STNICTSRTSTDTPQEYREYYEESRTPTGRAETRLT 462
++EY +PTNT P+ +++I +S + T Y + +++ G++ LT
Sbjct: 278 SNEYHSPTNTLPSYHTEADLDNSSIASSNRTQHTEDNYNKDVSDAQNSLGQSAVDLT 334
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 569 LMVVGESGLGKSTLINSLFLTEVYDKD 649
L+++GE+G GK+T I E Y D
Sbjct: 529 LVLLGETGSGKTTQITQYLAEEGYTSD 555
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 579 TTINVNSKPFFTAFLYTWFGRLA 511
T + N KP+F +YT FG L+
Sbjct: 932 TQLGYNPKPYFYLGIYTLFGLLS 954
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 9.4
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Frame = +2
Query: 416 MKKAEHPPVAPKP--------DLPKIEKPKTKELD-GYVGFANLPNQVYRKAVKKGFEFT 568
+KK E P+ KP + P +EK L V F +P K V +
Sbjct: 485 IKKLEKLPILEKPQTEEEVEFEFPPVEKISPPILQMSDVNFEYVPGHPILKHVDIDVQMD 544
Query: 569 --LMVVGESGLGKSTLINSL 622
+ VVG +G GKST++ L
Sbjct: 545 SRIGVVGPNGAGKSTMLKLL 564
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 461 PKIEKPKTKELDGYVGFANLPNQVYRKAVK 550
P++E KT + + F+NLP+Q A K
Sbjct: 555 PRLEPTKTGSNNPFAQFSNLPSQSTAPATK 584
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +2
Query: 476 PKTKELDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKS 604
P++K L G + K++ +GF + G+ G GK+
Sbjct: 72 PESKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKT 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,179,336
Number of Sequences: 5004
Number of extensions: 37968
Number of successful extensions: 204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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