Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2n10
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 33 0.20
10_08_0842 - 20954712-20957738 32 0.45
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 31 1.0
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 30 1.4
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 30 1.4
06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066 30 1.8
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 29 2.4
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 29 2.4
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 29 2.4
03_06_0579 + 34870958-34874578 29 2.4
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 29 2.4
12_01_0603 + 4937472-4938351,4938597-4938689,4938820-4939589,493... 29 3.2
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 3.2
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 29 3.2
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 29 3.2
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 29 4.2
12_02_0722 - 22521909-22521932,22522291-22522419,22522976-225242... 29 4.2
12_02_0534 - 20103908-20105897,20106314-20107116 29 4.2
05_01_0372 - 2913518-2916562,2916674-2917528 29 4.2
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 29 4.2
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 29 4.2
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 29 4.2
12_01_1058 - 10928128-10928163,10929082-10929199,10929391-109294... 28 5.6
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 28 5.6
09_03_0062 - 11969719-11970036,11970115-11970843 28 5.6
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 28 5.6
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 28 5.6
12_02_0795 + 23217463-23217684,23218296-23219155,23220001-232209... 28 7.4
11_04_0341 - 16565757-16566418,16566668-16567799,16567965-16568549 28 7.4
10_01_0330 + 3614562-3614574,3614676-3615118,3617700-3617825,361... 28 7.4
07_03_0256 - 15875066-15877025,15877292-15877911 28 7.4
05_03_0255 + 11100083-11100158,11100244-11100391,11101372-111015... 28 7.4
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 28 7.4
03_02_0271 + 7029410-7029949,7030054-7030566 28 7.4
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 28 7.4
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 28 7.4
01_03_0135 - 12887020-12887307 28 7.4
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 27 9.7
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 27 9.7
06_03_0430 - 20710951-20711033,20711572-20712055 27 9.7
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 27 9.7
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 27 9.7
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 27 9.7
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 27 9.7
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 27 9.7
01_06_0186 + 27294973-27295211,27295610-27296045 27 9.7
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 27 9.7
>06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Frame = +2
Query: 401 STENIMKKAEHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRK---AVKKGFEFT- 568
S E I K+ H P P +P+ P + +G + +L + YR V KG T
Sbjct: 936 SVERI-KQYMHLPPEPPAIIPENRAPSSWPQEGQIDLQDLKVR-YRPNMPLVLKGITCTF 993
Query: 569 -----LMVVGESGLGKSTLINSLF 625
+ VVG +G GKSTLI+SLF
Sbjct: 994 PAGNKIGVVGRTGSGKSTLISSLF 1017
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSLF 625
F T++V+G++G+GKS INS+F
Sbjct: 382 FSCTILVLGKTGVGKSATINSIF 404
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 391 TPQEYREYYEESRTPTGRAETRLT*NRKTKNQRTRWLRRFC*SAEPSVQESCEEGLRIHV 570
T Q + E++ + TP RA + +T+NQ WL + + V E+ E G +V
Sbjct: 134 TEQVWEEFHAKKSTPESRARSEAYRLLQTRNQHPHWLGTAGYAEDQRVYEAIEYGFPDYV 193
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 551 KGFEFTLM-VVGESGLGKSTLINSLFLTEVYDKD 649
+G + ++ +VG G GKSTL+N LF T + D
Sbjct: 44 RGLSYAVVSIVGPQGSGKSTLLNQLFGTSFTEMD 77
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T+ VVG + GKSTL+++L T++Y D
Sbjct: 289 TVAVVGYTNAGKSTLVSALSETDLYSDD 316
>06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066
Length = 489
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 103 TRAVFQVGHCKRWRRKRVCPAFCSTARASFHAQRCA 210
TR V CKRWRR P+F + RA FH + A
Sbjct: 35 TRLVRASAVCKRWRRVLADPSFAARHRA-FHPRAAA 69
>05_07_0004 +
26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLIN 616
T+ +VGESG GKST+IN
Sbjct: 399 TMAIVGESGSGKSTVIN 415
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLIN 616
T+ +VGESG GKST+IN
Sbjct: 422 TMAIVGESGSGKSTVIN 438
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSL 622
T ++VG SG+GKS+LIN+L
Sbjct: 158 TTVIVGPSGVGKSSLINAL 176
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSLF 625
F ++V+G++G+GKS INS+F
Sbjct: 583 FSCNVLVLGKTGVGKSATINSIF 605
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 437 PVAPKPD-LPKIEKPKTKELDGYVGFANLPNQVYRKAVKKGFEF--TLMVVGESGLGKST 607
P KPD L K+E +K + + LP Y+ A+ E +++ GE+G GK+T
Sbjct: 254 PALRKPDILKKVEMLASKIVQDR---SKLPISSYKDAISSTLENHQVVLISGETGCGKTT 310
Query: 608 LINSLFLTEVYDK 646
+ L ++ K
Sbjct: 311 QVPQYILDHMWGK 323
>12_01_0603 +
4937472-4938351,4938597-4938689,4938820-4939589,
4939706-4939809,4940026-4940548,4940697-4941074
Length = 915
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 428 EHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKAVKKG 556
+H P+ K ++KPKTK+ +G + + RK +KKG
Sbjct: 22 KHLPIMGKSVKKSVKKPKTKKASSGLGPSIFSEKRLRKLLKKG 64
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 488 ELDGYVGFANLPNQVYRKAVKKGFEF--TLMVVGESGLGKSTLINSLF 625
ELD VG P K++ G + + +VG GLGKSTL N ++
Sbjct: 213 ELDALVGIDG-PRDEIIKSLDDGEQRMKVVSIVGSGGLGKSTLANQVY 259
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T+ +VGESG GKST+I L YD D
Sbjct: 968 TIALVGESGSGKSTII--ALLERFYDPD 993
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLIN 616
T+ +VGESG GKST+I+
Sbjct: 401 TMAIVGESGSGKSTVIS 417
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSL 622
F ++V+G+ G+GKST+INS+
Sbjct: 4912 FSCNILVLGKIGVGKSTVINSI 4933
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = +2
Query: 488 ELDGYVGFANLPNQVYRKAVKKGFEFT------LMVVGESGLGKSTLINSLF 625
E DG VG P V K + +G + + + +VG GLGK+TL N ++
Sbjct: 217 ESDGLVGIET-PRAVLVKLIMEGDDASFQQLKVISIVGPGGLGKTTLANEVY 267
>12_02_0722 -
22521909-22521932,22522291-22522419,22522976-22524242,
22524659-22525461
Length = 740
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 569 LMVVGESGLGKSTLINSLF 625
+ +VG GLGK+TL NSLF
Sbjct: 189 ISIVGFGGLGKTTLANSLF 207
>12_02_0534 - 20103908-20105897,20106314-20107116
Length = 930
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 569 LMVVGESGLGKSTLINSLF 625
+ +VG GLGK+TL NSLF
Sbjct: 189 ISIVGFGGLGKTTLANSLF 207
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSLF 625
F ++V+G+ G+GKS INS+F
Sbjct: 660 FSCNILVLGKIGVGKSATINSIF 682
>01_05_0215 + 19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSLFLTEVYDKD 649
F+ T +VGESG GKST+I+ L Y+ D
Sbjct: 963 FQNTAALVGESGSGKSTVIS--LLERFYEPD 991
>01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 557 FEFTLMVVGESGLGKSTLINSLFLTEVYDKD 649
F T+ +VGESG GKST I L YD D
Sbjct: 1066 FHNTVALVGESGSGKSTAI--ALLERFYDPD 1094
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 518 LPNQVYRKAVKKGFE--FTLMVVGESGLGKSTLI 613
LP YRKA+ E T +VVGE+G GKST I
Sbjct: 51 LPVYKYRKAILYLVERHATTIVVGETGSGKSTQI 84
>12_01_1058 -
10928128-10928163,10929082-10929199,10929391-10929482,
10929620-10929707,10930614-10930840
Length = 186
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 481 NQRTRWLRRFC*SAEPSVQESCEEGLRI 564
+QR RWLRR C + + + E GLRI
Sbjct: 84 DQRRRWLRRRCTAVRGTAGQQREFGLRI 111
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 536 RKAVKKGFEFTLMVVGESGLGKSTLINSL 622
++A+ K +MVVG +GKS LINS+
Sbjct: 128 KEAISKEPTLLVMVVGVPNVGKSALINSI 156
>09_03_0062 - 11969719-11970036,11970115-11970843
Length = 348
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 391 TPQEYREYYEESRTPTGRAETRLT*NRKTKNQRTRWL 501
T Q + E++ + TP RA + +T+NQ WL
Sbjct: 141 TEQVWEEFHAKKSTPESRARSEAYRLLQTRNQHPHWL 177
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T+ +VGESG GKST I+ L YD D
Sbjct: 1060 TVALVGESGSGKSTAIS--LLQRFYDPD 1085
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T+ +VGESG GKST I+ L YD D
Sbjct: 1071 TVALVGESGSGKSTAIS--LLQRFYDPD 1096
>12_02_0795 +
23217463-23217684,23218296-23219155,23220001-23220929,
23221184-23221968
Length = 931
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +2
Query: 488 ELDGYVGFANLPNQVYRKAVKKGFEFT------LMVVGESGLGKSTLINSLF 625
E DG VG P V K + +G + + +VG GLGK+TL N +F
Sbjct: 251 ESDGLVGIEQ-PRDVVIKLLTEGEGASSQKLKVISIVGPGGLGKTTLANEVF 301
>11_04_0341 - 16565757-16566418,16566668-16567799,16567965-16568549
Length = 792
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 207 RSVSALRRYQSLRRLTT*KPMGSPRNTAIACR*MSPSLRVQRPHQHLPRQY 359
RSV +L RR +P PR + R M R R H+H P +Y
Sbjct: 309 RSVHSLPERHRERRAE--RPRSPPRQRPVDLRDMINQCRAARGHRHSPNRY 357
>10_01_0330 +
3614562-3614574,3614676-3615118,3617700-3617825,
3618379-3618786,3618871-3619311,3619399-3619779
Length = 603
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 391 TPQEYREYYEESRTPTGRAETRLT*NRKTKNQRTRWL 501
T Q + E++ + TP RA + +T+NQ WL
Sbjct: 228 TEQVWEEFHAKKLTPESRARSEAYRLLQTRNQHPHWL 264
>07_03_0256 - 15875066-15877025,15877292-15877911
Length = 859
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFL 628
T+ +VG GLGK+TL N ++L
Sbjct: 130 TMAIVGCGGLGKTTLANQVYL 150
>05_03_0255 +
11100083-11100158,11100244-11100391,11101372-11101559,
11101648-11101819,11102637-11102839,11103640-11103762,
11103838-11103941,11105579-11105713
Length = 382
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T ++VG GKS L+N +T V+DKD
Sbjct: 100 TFLLVGPRDAGKSALVNR--ITRVFDKD 125
>05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +2
Query: 401 STENIMKKAEHPPVAPKPDLPKIEKPKTKELDGYVGFANLPNQVYRKA--VKKGFEFTLM 574
S E I K+ H P P + P + G + NL + R A V +G T
Sbjct: 1200 SVERI-KQFMHLPAEPPAVITDRRPPPSWPSAGRIELENLRVKYRRNAPTVLRGITCTFA 1258
Query: 575 ------VVGESGLGKSTLINSLF 625
VVG +G GK+TL+++LF
Sbjct: 1259 AGHKIGVVGRTGSGKTTLLSTLF 1281
>03_02_0271 + 7029410-7029949,7030054-7030566
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 635 PPSRRASLLVSTCPSLIHLRP 573
PP+RR V CP+L +LRP
Sbjct: 31 PPARRPLPAVDDCPTLAYLRP 51
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLFLTEVYDKD 649
T+ +VGESG GKST++ L YD D
Sbjct: 1026 TVALVGESGSGKSTVV--ALLERFYDPD 1051
>01_06_1699 - 39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 575 VVGESGLGKSTLINSLF 625
VVG +G GKSTLI++LF
Sbjct: 1177 VVGRTGSGKSTLIHALF 1193
>01_03_0135 - 12887020-12887307
Length = 95
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 416 MKKAEHPPVAPKPDLPKIEKPKTKELDGYVG 508
+K A+ PP+ P P +PK E+ +K D G
Sbjct: 64 VKPADLPPLLPTPTVPKEEETASKGADASSG 94
>12_02_0781 + 23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 575 VVGESGLGKSTLINSLF 625
+VG +G GK+TLIN++F
Sbjct: 982 IVGRTGSGKTTLINAIF 998
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSLF--LTEVYD 643
T+ +VG GLGK+T+ N +F L E +D
Sbjct: 327 TISIVGIGGLGKTTIANLIFEELREQFD 354
>06_03_0430 - 20710951-20711033,20711572-20712055
Length = 188
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 413 IMKKAEHPPVAPKPDLPKIEKPKTKE 490
++K A+ PP+ P P PK+++ K +E
Sbjct: 74 LVKPADLPPLLPTPQGPKLKEAKEEE 99
>06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 446 PKPDLPKIEKPKTKELD-GYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLINSL 622
P PD P++ K + ++L Y A L + G + + +VG +G GK+TLI L
Sbjct: 1219 PAPDWPQVGKVELRDLKIKYRQDAPLVLHGITCTFEGGHK--IGIVGRTGSGKTTLIGGL 1276
Query: 623 F 625
F
Sbjct: 1277 F 1277
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 575 VVGESGLGKSTLINSLF 625
VVG +G GKSTLI +LF
Sbjct: 1358 VVGRTGSGKSTLIQALF 1374
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLINSL 622
T++V+G+ G+GKS+ +NS+
Sbjct: 73 TILVMGKGGVGKSSTVNSI 91
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 491 LDGYVGFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLI 613
+ YV L ++ V + F L+++G+SG+GKS L+
Sbjct: 1 MTSYVYKGKLTFGIWEDNVLFDYLFKLLLIGDSGVGKSCLL 41
>01_06_0371 +
28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 566 TLMVVGESGLGKSTLIN 616
T+ +VGESG GKST+I+
Sbjct: 406 TMAIVGESGSGKSTVIS 422
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 533 YRKAVKKGFEFTLMVVGESGLGKSTLIN 616
YR + + F ++++G+SG+GKS L++
Sbjct: 10 YRAEEEYDYLFKVVLIGDSGVGKSNLLS 37
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 575 VVGESGLGKSTLINSLF 625
VVG +G GKSTLI +LF
Sbjct: 1317 VVGRTGSGKSTLIQALF 1333
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,390,556
Number of Sequences: 37544
Number of extensions: 262816
Number of successful extensions: 1420
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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