Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n10
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.39 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.51 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.51 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.51 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.51 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    27   0.51 
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            26   1.2  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   1.6  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   8.3  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   8.3  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 342 HLPRQYQYLHLPHQYRHPSGVQRIL 416
           HLP+QYQ     HQ  H  G ++++
Sbjct: 149 HLPQQYQQQQQQHQLEHNGGREQMM 173


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +3

Query: 327 QRPHQHL-PRQYQYLHLPHQYRHP 395
           Q PH H  P  +Q  H PH   HP
Sbjct: 90  QPPHHHQHPHHHQLPHHPHHQHHP 113


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +3

Query: 327 QRPHQHL-PRQYQYLHLPHQYRHP 395
           Q PH H  P  +Q  H PH   HP
Sbjct: 90  QPPHHHQHPHHHQLPHHPHHQHHP 113


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 569 LMVVGESGLGKSTLINSL 622
           L V+G SG GK+TL+N+L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 569 LMVVGESGLGKSTLINSL 622
           L V+G SG GK+TL+N+L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 569 LMVVGESGLGKSTLINSL 622
           L V+G SG GK+TL+N+L
Sbjct: 107 LAVMGSSGAGKTTLLNAL 124


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 506 GFANLPNQVYRKAVKKGFEFTLMVVGESGLGKSTLI 613
           G A  PN   +  +    +F L+++GES +GKS+L+
Sbjct: 9   GAAQRPNGATQNKI---CQFKLVLLGESAVGKSSLV 41


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 422 KAEHPPVAPKPDLPK 466
           +A HPPV P P +P+
Sbjct: 422 RATHPPVRPTPSVPR 436


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 563 FTLMVVGESGLGKSTLIN 616
           FT+ V G  G GK+T +N
Sbjct: 17  FTVFVEGNIGSGKTTFLN 34


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 563 FTLMVVGESGLGKSTLIN 616
           FT+ V G  G GK+T +N
Sbjct: 17  FTVFVEGNIGSGKTTFLN 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,051
Number of Sequences: 2352
Number of extensions: 9384
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)