Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n09
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +1

Query: 112 GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 258
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++
Sbjct: 472 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +1

Query: 112 GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 258
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++
Sbjct: 364 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 588 NLLPLCFFSFWLLLL 632
           NL  LCF  +WLL++
Sbjct: 320 NLFYLCFCFYWLLVM 334


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 588 NLLPLCFFSFWLLLL 632
           NL  LCF  +WLL++
Sbjct: 276 NLFYLCFCFYWLLVM 290


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 304  QYIVDLESFNANGGGPV 354
            QY V +++FN  G GP+
Sbjct: 1071 QYSVVVQAFNKVGAGPL 1087


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 649 LFCSITHNKMCFKEYFLYIFSLII 720
           L CSI    M F E+F +   +II
Sbjct: 197 LVCSIKELNMIFNEFFGWPIIMII 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,946
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)