Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2n07
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   0.83 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.83 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   5.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   5.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   7.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -1

Query: 240 RNSFVIKKPINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLV 94
           +N  ++      PNY        TY+  NKY      L+K++K K  L+
Sbjct: 5   KNKLLLLDSSTQPNYLILSNKNNTYLVLNKY-----LLVKHSKPKMPLL 48


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 217 FFYYKTVTKTVKYLFICEMVIISICI 294
           +FY   +  T+  LF C ++I+ +CI
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIIL-LCI 238


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 217 FFYYKTVTKTVKYLFICEMVIISICIVNKKQI 312
           F  YKT    +  L +  +V   IC + K+ +
Sbjct: 346 FMIYKTTNIIILGLNVVYVVTAWICAITKRDM 377


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 217 FFYYKTVTKTVKYLFICEMVIISICIVNKKQI 312
           F  YKT    +  L +  +V   IC + K+ +
Sbjct: 71  FMIYKTTNIIILGLNVVYVVTAWICAITKRDM 102


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 293 IQMEIITISQINKYFTVFVT 234
           +Q    T+ ++  YF +F+T
Sbjct: 216 LQTVFFTVPRVLMYFDIFIT 235


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = +3

Query: 156 CRTRKYARWWGCMNNSAYL*VFLLQNCYENSKI 254
           CR      W+  ++ + Y   +  Q+CY    I
Sbjct: 57  CRYTFLLEWYHTLSKACYDCPYNTQDCYREDCI 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,591
Number of Sequences: 336
Number of extensions: 2019
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)