Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2n07
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000128-1|AAH00128.1| 327|Homo sapiens immediate early respons... 29 2.6
AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein pr... 29 2.6
AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein SB... 29 2.6
BC069254-1|AAH69254.1| 697|Homo sapiens CDCP1 protein protein. 29 3.5
BC021099-1|AAH21099.1| 343|Homo sapiens CUB domain containing p... 29 3.5
AY375452-1|AAR21289.1| 691|Homo sapiens membrane glycoprotein g... 29 3.5
AY358779-1|AAQ89139.1| 343|Homo sapiens AGLN2486 protein. 29 3.5
AY167484-1|AAO34538.1| 836|Homo sapiens transmembrane and assoc... 29 3.5
AY026461-1|AAK02058.1| 836|Homo sapiens CUB domain containing p... 29 3.5
AK026622-1|BAB15511.1| 836|Homo sapiens protein ( Homo sapiens ... 29 3.5
AF468010-1|AAO33397.1| 836|Homo sapiens NCSG135 protein. 29 3.5
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 29 3.5
M57417-1|AAA63229.2| 294|Homo sapiens mucin protein. 28 8.0
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 28 8.0
AL356267-6|CAH72306.1| 327|Homo sapiens immediate early respons... 28 8.0
>BC000128-1|AAH00128.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 6 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 176
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
>AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein
protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 6 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 176
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
>AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein
SBBI48 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 6 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 176
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
>BC069254-1|AAH69254.1| 697|Homo sapiens CDCP1 protein protein.
Length = 697
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>BC021099-1|AAH21099.1| 343|Homo sapiens CUB domain containing
protein 1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AY375452-1|AAR21289.1| 691|Homo sapiens membrane glycoprotein
gp140 protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AY358779-1|AAQ89139.1| 343|Homo sapiens AGLN2486 protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AY167484-1|AAO34538.1| 836|Homo sapiens transmembrane and
associated with src kinases protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AY026461-1|AAK02058.1| 836|Homo sapiens CUB domain containing
protein 1 protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AK026622-1|BAB15511.1| 836|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22969 fis, clone KAT10759. ).
Length = 836
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AF468010-1|AAO33397.1| 836|Homo sapiens NCSG135 protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 204 PNYSYTPTIGRTYVYDNKYYKNLG 133
P+ S PT+ RT+++D K +K++G
Sbjct: 113 PSTSLLPTLNRTFIWDVKAHKSIG 136
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 191 TPPPSGVLTCTTINITKTWAVLSKTPSAR----ST*SNMNKRRSNGI 63
T PPS T TTI I+ TW L+ + R +T S+ K R N I
Sbjct: 1414 TEPPSATTT-TTIGISATWTTLAGSHGKRNNTITTTSSKRKNRKNKI 1459
>M57417-1|AAA63229.2| 294|Homo sapiens mucin protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 191 TPPPSGVLTCTTINITKTWAVLSKTPSARST 99
TP P+G T T IT T +++ TP+ ST
Sbjct: 3 TPTPTGTQTPTPTPITTTTTMVTPTPTITST 33
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 191 TPPPSGVLTCTTINITKTWAVLSKTPSARST 99
TP P+G T T IT T +++ TP+ ST
Sbjct: 223 TPTPTGTQTPTPTPITTTTTMVTPTPTITST 253
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 191 TPPPSGVLTCTTINITKTWAVLSKTPSARST 99
TP P+G T TT+ IT T ++ TP+ ST
Sbjct: 44 TPTPTGTQTPTTVLITTT-TTMTPTPTPTST 73
>AL356267-6|CAH72306.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 6 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCA 113
+G P + R R+PC C EDP +P R CA
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCA 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,997,103
Number of Sequences: 237096
Number of extensions: 982451
Number of successful extensions: 2030
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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