Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2m08
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -2

Query: 175 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 32
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -2

Query: 175 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 32
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -2

Query: 175 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 32
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -2

Query: 175 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 32
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 374 SNPQNAAEAVKATNNCKLD 430
           SNPQN  +   A   CK D
Sbjct: 463 SNPQNEVDGSVAPKECKQD 481


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -1

Query: 614 PGEPHQSQCQQG-TGHMHQDPLN 549
           PG  H+ QCQ G TG    + +N
Sbjct: 48  PGVGHRCQCQPGFTGKYCHENIN 70


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 414 FVAFTASAAFCGLLYSRKMYPVVSPFSVV 328
           F      AA CG+L +  + P+  P ++V
Sbjct: 456 FAMLELKAAICGILANFTLEPIDIPETIV 484


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 414 FVAFTASAAFCGLLYSRKMYPVVSPFSVV 328
           F      AA CG+L +  + P+  P ++V
Sbjct: 456 FAMLELKAAICGILANFTLEPIDIPETIV 484


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,686
Number of Sequences: 336
Number of extensions: 4581
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)