Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2m04
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.7  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 15 WRSCVRFLLKHVWFL 59
          W   +  +LKHVWFL
Sbjct: 2  WSENITDVLKHVWFL 16


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 582 PGTASCKSAGVCSSAGQQMDCVTNRIIG 665
           PG A  + A VC  A Q  +C    + G
Sbjct: 126 PGLAYDREARVCMWADQVPECKNEEVAG 153


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 582 PGTASCKSAGVCSSAGQQMDCVTNRIIG 665
           PG A  + A VC  A Q  +C    + G
Sbjct: 126 PGLAYDREARVCMWADQVPECKNEEVAG 153


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 472 LIAIRCRTLVPNATRSYFCHQQQR 543
           +IA    TL+   T +Y+ H+Q+R
Sbjct: 385 IIAPLIATLIATVTVNYYRHKQKR 408


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 674 LQCSNNPVRHA 642
           +QCSN+P+R A
Sbjct: 60  IQCSNSPLRKA 70


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 583 GYSGAHASPPSTETV 539
           GY+G+  +PPS + V
Sbjct: 49  GYTGSEETPPSPQEV 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,328
Number of Sequences: 336
Number of extensions: 3924
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)