Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2m02
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   2.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.5  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   9.5  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   9.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   9.5  

>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 536 ARRSFSGLPGPLGQGEHADSFSVARV 459
           A RS S L  PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 563 GDNCKPQSPARRSFSGLPGPLG 498
           G  C P+  A +   GLPGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -3

Query: 626 KGRDVINASL*LALTRNSSFMGDNCKPQSPARRSFSGLPGPLGQ 495
           KG +V  A+     T      GD  +P  P R    G  G  GQ
Sbjct: 287 KGEEVYGATGTTTTTGPKGEKGDRGEPGEPGRSGEKGQAGDRGQ 330


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 128  QEWSLRLNLTQHGKSHQARTPEG 196
            Q+W +R N     +  + RTP+G
Sbjct: 1912 QQWEVRYNYDNANRLIRKRTPDG 1934


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 266 ICLVNSGNERDSSLLNRRRYLG 331
           ICL+ + +  D+S LN++ + G
Sbjct: 44  ICLIQNESRYDTSALNKKNWNG 65


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 193 FRCPGLVRFPVLSQIKP 143
           F CPGL++F  ++ + P
Sbjct: 222 FLCPGLLKFTGINSLSP 238


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 541 DWGLQLSPINEEFLVSASHK 600
           D GL+++P   EF++ +SH+
Sbjct: 670 DNGLKIAPTKTEFIMVSSHQ 689


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,185
Number of Sequences: 2352
Number of extensions: 18877
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)