Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2m02
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   2.1  
AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA...    30   2.8  
AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    29   6.4  
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    29   8.4  

>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 272 DKSLHQLRTAMHHHPPNQE 216
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA
           protein.
          Length = 600

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -3

Query: 239 HHHPPNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPSIPLSFSFATILPPESKI 60
           HHH P+Q + V  +++    P +   V S   AG+ P    P   LS S      P++ +
Sbjct: 188 HHHHPHQPQPVPSAVVTTVAPSQPPAVVSALYAGTQPPTPSPRRKLSNSSFGNANPQADV 247

Query: 59  F 57
           F
Sbjct: 248 F 248


>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 121 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 219
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETAPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 121 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 219
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETVPLAVSASSKDIKGAPSIGALDTLTATS 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,929,331
Number of Sequences: 53049
Number of extensions: 877792
Number of successful extensions: 2436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)