Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2l20
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   0.98 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   6.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   6.9  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   9.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -2

Query: 157 QTRRCLGKRQECVKEEIQTMESKEIEEKQRGKCRQ 53
           Q +R L   Q+ ++++ Q +  KE+E ++RG+  Q
Sbjct: 326 QEQRKLKNLQKSIRDDEQALAGKEVEMQRRGESFQ 360


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 8/42 (19%)
 Frame = -2

Query: 184 PKFNQFC*TQTRRCLGKR--------QECVKEEIQTMESKEI 83
           PK N+ C T  RR    R        Q+C+ EE++ ++  EI
Sbjct: 146 PKSNRNCRTAARRNHSSRNTCRRNCYQQCIYEELEAVDGLEI 187


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 434 PSSAAPHTPSTLAELMIP 487
           PSS+ P TP+T+  L+ P
Sbjct: 460 PSSSPPLTPNTICGLIAP 477


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 440 SAAPHTPSTLAELMIPYLTEIITSCHHYMIF 532
           SAAP  P     +  P+L  I+   H Y +F
Sbjct: 441 SAAPPPPIINFAVNEPFLMMIVDKIHEYPLF 471


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,742
Number of Sequences: 2352
Number of extensions: 11961
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)