Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2l20
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA...    34   0.21 
AE014134-580|AAF51128.1|  757|Drosophila melanogaster CG3277-PA,...    29   6.0  
AE014134-579|AAN10388.2|  808|Drosophila melanogaster CG3277-PB,...    29   6.0  
AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P...    29   7.9  
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P...    29   7.9  
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P...    29   7.9  

>AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA
           protein.
          Length = 457

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 439 RGLYSSDSRSRIPTGYCKPTLH 374
           RGLYS+D  +++PT  C PT+H
Sbjct: 351 RGLYSADELAQLPTNVCYPTVH 372


>AE014134-580|AAF51128.1|  757|Drosophila melanogaster CG3277-PA,
           isoform A protein.
          Length = 757

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 330 VVSSKDEHKALMFSEFKRIFADRSIKTAAFEDHQERDHRDIAARGLLVIQN 178
           +V  +D  + ++ ++    FA +      F + QE  HRD+AAR +L+  N
Sbjct: 565 IVEDEDAFEYILDNKELHNFALQIANGMRFLEEQEITHRDLAARNVLIDSN 615


>AE014134-579|AAN10388.2|  808|Drosophila melanogaster CG3277-PB,
           isoform B protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 330 VVSSKDEHKALMFSEFKRIFADRSIKTAAFEDHQERDHRDIAARGLLVIQN 178
           +V  +D  + ++ ++    FA +      F + QE  HRD+AAR +L+  N
Sbjct: 616 IVEDEDAFEYILDNKELHNFALQIANGMRFLEEQEITHRDLAARNVLIDSN 666


>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
           isoform B protein.
          Length = 4106

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 440 KRAVQFRQQVQDSHRILQTYTPFSTLKRDTEI 345
           KR  QF++++ +   I Q Y   +TL  DTE+
Sbjct: 271 KRGQQFKERLSEIRSIKQLYKQIATLLEDTEL 302


>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
           isoform C protein.
          Length = 4061

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 440 KRAVQFRQQVQDSHRILQTYTPFSTLKRDTEI 345
           KR  QF++++ +   I Q Y   +TL  DTE+
Sbjct: 271 KRGQQFKERLSEIRSIKQLYKQIATLLEDTEL 302


>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
           isoform A protein.
          Length = 4019

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 440 KRAVQFRQQVQDSHRILQTYTPFSTLKRDTEI 345
           KR  QF++++ +   I Q Y   +TL  DTE+
Sbjct: 271 KRGQQFKERLSEIRSIKQLYKQIATLLEDTEL 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,284,927
Number of Sequences: 53049
Number of extensions: 524277
Number of successful extensions: 1638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)