Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2l14
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 40 4e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.043
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.057
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.076
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 32 0.100
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 32 0.100
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 32 0.100
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 31 0.23
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 30 0.30
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 30 0.40
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 30 0.40
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 29 0.70
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.93
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 0.93
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 0.93
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.2
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 3.8
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 27 3.8
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 27 3.8
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 27 3.8
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 26 5.0
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 5.0
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.0
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 26 5.0
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 5.0
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 6.6
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 6.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 6.6
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 6.6
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 26 6.6
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 8.7
SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyc... 25 8.7
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +2
Query: 425 DRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE-- 598
+++ A+ +A AE ++ K +EV +L L EQ+ E ++E ++ ++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 599 -LRVVGNNLKSLEVSEEKAMASREHVEDKIHS 691
LR+ +N + E+ E +E+++ +
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELET 97
Score = 39.5 bits (88), Expect = 5e-04
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A A+ EA A+ +E K +E + ++++ L + A+ EE +++ +++ +
Sbjct: 11 ARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQL--R 68
Query: 515 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 694
L +D+++ E AEQ K+ LEEEL L+ + EH E ++ SL
Sbjct: 69 LKADNEDIQKTE--AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSL 126
Query: 695 SQK 703
++
Sbjct: 127 ERE 129
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.043
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 554 VPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEP 444
+PPPS AP + APP+ S P P + A+PV P
Sbjct: 149 IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.4 bits (53), Expect = 8.7
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = -3
Query: 557 RVPPPSLGPAP*EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDHP--PCWCGSPAPCVF 384
+VPPP L AP + P + P A VT E P++ P P P P
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAGH--APNVTSESPKFPNRGPSIPSASVPPVPPSS 257
Query: 383 ARIHRRP 363
+ +RP
Sbjct: 258 YVLQQRP 264
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 32.7 bits (71), Expect = 0.057
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A ++SE +A+ + I+ A++ R + + A +A+ +A+L AEE+ K+ E K
Sbjct: 513 APPQISE-EEASQRKDAIKLAIQQRIQEKAEAEAKRKAE-EKARLEAEENAKREAEEQAK 570
Query: 515 LVLMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 667
E+ AEE+A+ +++ K EE K+ +EEKA E
Sbjct: 571 REAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAE 622
Score = 32.7 bits (71), Expect = 0.057
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +2
Query: 329 ATATAKLSEASQAADESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 505
A A+L A E+E + ++ E + E + A EA+ +AK AEE+ K+ E
Sbjct: 549 AEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAE-EKAKREAEENAKREAEE 607
Query: 506 ARKLVLMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 667
K E+ AEE+A+ +++ K EE K+ +EEKA E
Sbjct: 608 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 662
Score = 30.7 bits (66), Expect = 0.23
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 329 ATATAKLSEASQAADESE-RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 505
A AK +A E+E + ++ E + E + A EA+ +AK AEE K+ E
Sbjct: 597 AEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE-EKAKREAEEKAKREAEE 655
Query: 506 ARKLVLMEQDLERAEERAEQSDCKIVELEEELRV 607
K E AEE+A++ + + E E +V
Sbjct: 656 KAKREAEENAKREAEEKAKREAEENAKREAEEKV 689
Score = 29.9 bits (64), Expect = 0.40
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +2
Query: 350 SEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLME 529
+E + E+ ++ E + E + A EA+ +AK AEE K+ E K E
Sbjct: 613 AEEKAKREAEEKAKREAEEKAKREAEEKAKREAE-EKAKREAEEKAKREAEENAKREAEE 671
Query: 530 QDLERAEERAEQSDCKIVELEEE 598
+ AEE A++ + V+ E E
Sbjct: 672 KAKREAEENAKREAEEKVKRETE 694
Score = 28.7 bits (61), Expect = 0.93
Identities = 26/111 (23%), Positives = 50/111 (45%)
Frame = +2
Query: 350 SEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLME 529
+E + E+ ++ E + E + A EA+ +AK AEE+ K+ E K E
Sbjct: 637 AEEKAKREAEEKAKREAEEKAKREAEENAKREAE-EKAKREAEENAKREAEEKVKRETEE 695
Query: 530 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK 682
+AEE ++ K E++ + + +++ S++ A+ V DK
Sbjct: 696 NAKRKAEEEGKREADKNPEIKSSAPLASSE-ANVDTSKQ-TNATEPEVVDK 744
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.3 bits (70), Expect = 0.076
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 341 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLS--QAKLIAEESDKKYEEVARK 514
+ ++E Q +R LE +T +R+ +E + Q+KLIA D +
Sbjct: 885 SNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVE 944
Query: 515 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 694
+ + +LER +E+ ++ + ++++ + K+LE+ E + VE +I +
Sbjct: 945 VEAISIELERTKEKLRMAELEKSNIQQKYLA---SEKTLEMMNETHEQFKHLVESEISTR 1001
Query: 695 SQKL 706
+K+
Sbjct: 1002 EEKI 1005
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/93 (22%), Positives = 41/93 (44%)
Frame = +2
Query: 428 RVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRV 607
R+ L +L K I+ +KK+EE L L + +++ ++ L E +
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQ----------LQLTSLTSERSL 720
Query: 608 VGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 706
L LE S + S++ +++ SL ++L
Sbjct: 721 ALEKLNDLEKSLVLSERSKDELDESYKSLQEQL 753
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 31.9 bits (69), Expect = 0.100
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +1
Query: 112 DKHAARNDFRRFEEENASNERGNGKI*GRVRGVPQTVASGNYAKRRS*VRSGCPEPTYPT 291
D H++R R++E+E NGK R G P + SGN A S P YPT
Sbjct: 3 DSHSSR---RKYEKEKLVFATNNGK---RTEGTPAFLKSGNTASSSSPTLQFRPTSRYPT 56
Query: 292 AGGGP 306
P
Sbjct: 57 LSHEP 61
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 31.9 bits (69), Expect = 0.100
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 356 ASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE-SDKKYE-EVARKLVLME 529
A+Q A E ER R A + + AI AQ Q ++ E+ + ++++ + +L +E
Sbjct: 362 AAQQAAEMERQRMAAQQHQQALE---AIQMAQAEQQRIAQEQLAQQQFQMQTQGQLAELE 418
Query: 530 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 706
Q L + EQS+ + + + +R + N L V+ ++ + +D I SL ++
Sbjct: 419 QQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQN---DDLIESLKNQI 474
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 31.9 bits (69), Expect = 0.100
Identities = 29/118 (24%), Positives = 59/118 (50%)
Frame = +2
Query: 341 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 520
A L++ Q ++ R K +++ N+ V L+ + S+ + ++ ++ +E+A+K +
Sbjct: 152 ATLADLEQFSNPITRPSKEVDSLENI----VTKLDLE-SEDLMRLKKQEQLDDEIAKKYL 206
Query: 521 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 694
L +Q+ AEE Q IV E+E N+KSLE +++ H+ D + +
Sbjct: 207 LGQQE---AEEPLVQQQTSIVNPEKEEVTKTENIKSLEGELMGTISAELHLFDAVEEV 261
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 30.7 bits (66), Expect = 0.23
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Frame = +2
Query: 338 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQ--LSQAKLIAEESDKKYEEVAR 511
TA L E D E ++ L+N++ + AIL + L + K I ++ ++ + +
Sbjct: 261 TASLEEYLNDPDFEENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNESSSTI-Q 319
Query: 512 KLVLMEQDLERAEERA-------EQSDCKIVELEEELRVVGNNLKSLEVSEE-KAMASRE 667
K ++Q+ +EE A +++ +I EEE++ + E EE S
Sbjct: 320 KENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEEEEEEEVPNYESEN 379
Query: 668 HVEDKIHSLSQKL 706
+EDK+ LS L
Sbjct: 380 ELEDKVGDLSLSL 392
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 30.3 bits (65), Expect = 0.30
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +2
Query: 341 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 520
++L E S+ D SE+ EN N +R+A LE+ LS +++ E+ +
Sbjct: 930 SRLFEISKQLDNSEQ-----EN--NKFRERIAELESHLSNYAEAKLAQERELEQTRVLIS 982
Query: 521 LMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVS 640
QD E +E E+ + ++ +EEE+R V + N + L V+
Sbjct: 983 DQSQDGE-LKELLEEKENALIMMEEEMRQVNDANTELLRVN 1022
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.9 bits (64), Expect = 0.40
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Frame = +2
Query: 338 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 517
T L E A E + + + +R + +R++ LE Q++ A D+KYE + +
Sbjct: 873 TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIA-------DEKYEFLYAEK 925
Query: 518 VLMEQDL-ERAEERAEQSDC------KIVELEEELRVVGNNLKSLEVSEEKAMASREHVE 676
+E+DL + E + SD K+ ++++ + + + K LE MA +H
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSS 985
Query: 677 DKIHSLSQKL 706
+ +L + +
Sbjct: 986 QHLSNLEKAI 995
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 419 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEE 598
+D + L+ QL K +A E E V + + DL+ + A + D +
Sbjct: 841 KDALINNLQNQLESTKEVANELTITKERVLQ----LTNDLQEEQALAHEKDILVERANSR 896
Query: 599 LRVVGNNLKSLE 634
+ VV L SLE
Sbjct: 897 VEVVHERLSSLE 908
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 29.9 bits (64), Expect = 0.40
Identities = 23/114 (20%), Positives = 53/114 (46%)
Frame = +2
Query: 362 QAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLE 541
+A +++E+IR+ + N D+ E ++ + K +V V++E
Sbjct: 456 RARNDAEKIRQLEKASGNASDEGELNDEEEVISSSNTPSTKAKTTNKVIISDVIIEAT-- 513
Query: 542 RAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 703
+AE + Q + ++V EE+L + ++++SE ++ + + D LS +
Sbjct: 514 QAEPKRRQKNSRVVFDEEDLTGDSHGSSNMKISESDDESNGDMIRDSFDRLSSE 567
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex subunit
Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 29.1 bits (62), Expect = 0.70
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 428 RVAILEAQLSQAKLIA-EESDKKYEEVARKLVLMEQ--DLERAEERAEQSDCKIVELEEE 598
+V ILE++L L E ++KY E RKL L+E+ DL++ +A +S ++ EL
Sbjct: 870 KVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKA-RSIMQLDELNSR 928
Query: 599 LRVV 610
RV+
Sbjct: 929 KRVL 932
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 0.93
Identities = 30/164 (18%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Frame = +2
Query: 233 IMRREEA-ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENR 409
IM+ + A E + + L+R+I+ + +K+SE E A+ +
Sbjct: 298 IMKSKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSE 357
Query: 410 TNMEDDRVAILEAQ----LSQAKLIAEESDKKYEE--VARKLVLMEQDLERAEERAEQSD 571
+ + R+ +L+ Q L + ++ + KK + + +L+ + +++ +E ++
Sbjct: 358 ADDLNKRIMLLKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLK 417
Query: 572 CKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 703
+ E+E EL+ + K +E+S E + I S++++
Sbjct: 418 TEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINER 461
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 28.7 bits (61), Expect = 0.93
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +2
Query: 446 AQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLK 625
A LS K E K Y+E K + D+E + + EQ + + LE L + K
Sbjct: 531 ANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNK 590
Query: 626 SLEVSEEKAMASREHVEDKIHS 691
E+ +A E ++ + S
Sbjct: 591 QKGEVLEQVVAESEAAKNMVES 612
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.7 bits (61), Expect = 0.93
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 521 EQACAPPLRISCPTPRR*ASPVTVEPPRWQRDH 423
++A APP+ I CP R+ TV R+QRDH
Sbjct: 1341 QRASAPPIDIYCPGSRQ----FTVLQSRFQRDH 1369
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +2
Query: 350 SEASQAADESERIRKALENRTNMEDDRVAILEA---QLSQAKLIAEESDKK--YEEVARK 514
S+A ERI+K +EN + + D + + + + L ES K+ EV
Sbjct: 855 SQAEIVGANKERIQKTVENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTL 914
Query: 515 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNN---LKSLEVSEEKAMASREHV 673
L+++ E +E+ ++ ++++L E L VGNN + S++ + +HV
Sbjct: 915 DRLLQKVKEHSEDNTKEKHQQLLDLLESL--VGNNDNLIDSIKTPHTELQKITDHV 968
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 581 VELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 706
+E EEE + NNLK+L S + +M S +V+ + + S L
Sbjct: 269 IEGEEEGECLFNNLKALIYSPDLSMDSSNYVQSVVQTSSSIL 310
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 491 KYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREH 670
++ E A + V E+D E ++S+ K V+ E E+R + N L L + A
Sbjct: 252 RFLENALEKVQREKDSLSTEMEEDKSN-KEVDYEYEIRQLQNRLDELSEELDVAQDLLTE 310
Query: 671 VEDKIHSLSQKL 706
ED+I +L +++
Sbjct: 311 KEDEIATLKRQI 322
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 347 LSEASQAADESERIRKALENRTNME----DDRVAILEAQLSQAKLIAEESDKK 493
LSE AA R + LEN T +E ++ A L+ SQ K A+ES K
Sbjct: 181 LSERKSAAKPVGRTVEKLENATKVEKSAPEELFASLKKSASQKKSAAKESKPK 233
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 224 ATVCGTPRTRPYIFPFPLSFDAFSSSKRLKSFLAACLS 111
A+V GTP RP F FP S K+ A +S
Sbjct: 771 ASVDGTPMVRPLFFEFPKQISLASVDKQFMIGTALLIS 808
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 479 ESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGN-NLKSLEVSEEKAM 655
+SD K A + V E DL+ AE + + + ++ + V+ N +S+E+A
Sbjct: 36 DSDPKAHRAALRSVTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAA 95
Query: 656 ASREHVE 676
S++ E
Sbjct: 96 RSKQKQE 102
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/68 (19%), Positives = 33/68 (48%)
Frame = +2
Query: 473 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKA 652
+ ++ KKY+ + +K + +DLE+ + S +L E + +SL+ E+
Sbjct: 1407 SSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREITKQKNMLEQSLDDMRERQ 1466
Query: 653 MASREHVE 676
++ +++
Sbjct: 1467 RSTNRNLD 1474
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 473 AEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKS 628
A+ +KK+ E R L+ E EQ IV +EE + V K+
Sbjct: 219 AKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 5.0
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 380 ERIRKALENRTNMEDDRV--AILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE 553
E+ K +N T + +R A +E + S A + + ++ +E AR+L E L+ +E
Sbjct: 839 EQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQE 898
Query: 554 RAEQSDCKIVELEEEL 601
R Q + +++EE+
Sbjct: 899 RERQLQEERQKMQEEV 914
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 26.2 bits (55), Expect = 5.0
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +2
Query: 392 KALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEE---RAE 562
K+ E+ + + D V I + S ++L EES++ E K + +++ R
Sbjct: 198 KSTEHDSTL-DSGVVIDGREKSSSELHEEESEQAAEGDTAKNSGTDAQAPLSDDEWLRLH 256
Query: 563 QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLS 697
++ K + EEE+ VVG+ LKS + R DKI S
Sbjct: 257 RTRIKEKQPEEEVSVVGDELKSFDKENNDEHLERV-TNDKIADAS 300
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 650 PSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLG 534
PSP+ LP S Y + PP + + + + P P+ G
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYG 440
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/73 (19%), Positives = 40/73 (54%)
Frame = +2
Query: 431 VAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVV 610
+A E QL + + ++ ++ ++V+ + L + + E+ + +E K + EE + +
Sbjct: 202 LAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQ-EERIEKL 260
Query: 611 GNNLKSLEVSEEK 649
+N +++E+ +E+
Sbjct: 261 SSNNRNVEILKEE 273
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 503 VARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK 682
V R + E + RAE++ ++L+ L G N+K S +K +R H + K
Sbjct: 72 VERLINRKENGSHQVSNRAERNR---LQLKRSLERAGINIKFAPPSNKKRRLNRTHYDKK 128
Query: 683 IH 688
H
Sbjct: 129 SH 130
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 6.6
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = -3
Query: 671 RARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPP--PSLGPAP*EQACAPPL 498
R P P+P LP + APP +PP P P P APPL
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA-APPLPPSAPIAPPLPAGMPAAPPL 469
Query: 497 RISCPTPRR*ASPVTVEP 444
+ P P +P P
Sbjct: 470 PPAAPAPPPAPAPAPAAP 487
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +2
Query: 383 RIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAE 562
R+R+ E +T+ EDD + ++S + + + ++ L +E D+E E +
Sbjct: 130 RVREEQEEKTDNEDDN----DVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFD 185
Query: 563 QSDCKIVE 586
D ++++
Sbjct: 186 DQDLQMLQ 193
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 496 RRGGAQACSYGAGPREGGGTRRTKR 570
+RGG GPR G G+R+ KR
Sbjct: 229 QRGGTLEAPRKGGPRSGVGSRKRKR 253
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 6.6
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 449 QLSQAKLIAEESDKKYEEVARKLVLMEQDLE---RAEERAEQSDCKIVELEEELRVVGNN 619
+LSQ E+ KKYE+ +KL+ E + E ++ +S+ LEEE
Sbjct: 250 RLSQDAQEEEKQKKKYEQHIKKLLDGESNEEGGGEFQDHGMRSEINEEVLEEEDEEKIAL 309
Query: 620 LKSLEVSEEKAMASREHVEDK 682
LK LE ++ MA+R + K
Sbjct: 310 LKKLE--SKQPMATRFEITSK 328
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 383 ARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQLL 246
AR H RP R + R + + A G PP+ + SG R + L
Sbjct: 82 ARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRARNL 127
>SPCC285.08 |ret2||coatomer delta subunit Ret2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 452 LSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSL 631
L+Q K E + +EE +++V +++E EER + ++ +E R NL S
Sbjct: 127 LTQIKTYLEM--ESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARRAAQNLPSA 184
Query: 632 EVSE 643
+ E
Sbjct: 185 DAYE 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,522,864
Number of Sequences: 5004
Number of extensions: 49331
Number of successful extensions: 234
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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