Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2l14
(748 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 40 6e-05
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 28 0.27
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.47
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.61
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 26 1.1
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 4.3
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 24 5.7
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 24 5.7
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 24 5.7
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 24 5.7
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.7
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 24 5.7
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 7.6
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 40.3 bits (90), Expect = 6e-05
Identities = 22/104 (21%), Positives = 54/104 (51%)
Frame = +2
Query: 392 KALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSD 571
K L+ + N ++ L A +S+ + + S++ ++ K+ ME ++E A+ + +
Sbjct: 896 KVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGN 955
Query: 572 CKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 703
+ +LEEE + L+ ++++ EKA ++ +I +L ++
Sbjct: 956 DERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKR 999
Score = 29.5 bits (63), Expect = 0.12
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
AT K E +E E+++ L D+ + L S+ K+ + D+ E RK
Sbjct: 453 ATLK-DETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKIC--QHDEVTER--RK 507
Query: 515 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVS-EEKAMASRE 667
L + E E+ E+ ++ LEE L V L++ + +E A RE
Sbjct: 508 LESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 28.3 bits (60), Expect = 0.27
Identities = 16/88 (18%), Positives = 45/88 (51%)
Frame = +2
Query: 443 EAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNL 622
E L ++K +EES K +++ + ++ ++E ++ + + V+LEE++ + L
Sbjct: 793 EEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRL 852
Query: 623 KSLEVSEEKAMASREHVEDKIHSLSQKL 706
+ + ++ A+ ++ +I +K+
Sbjct: 853 VEVSGTTDEMTAAVTALKQQIKQHKEKM 880
Score = 25.8 bits (54), Expect = 1.4
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 443 EAQLSQAKLIAEESDKKYEEVARKLVLMEQDLERAEERAEQSDCKIV-ELEEELRVVGNN 619
E ++ + + ES++K E +EQ+ + +ER + ++ ELE++L V
Sbjct: 250 ERTIANLQSVIGESEQKIESNCATAQTLEQEAKELQERIDTEGGGVLGELEQQLAVESK- 308
Query: 620 LKSLEVSEEKAMASREHVEDKIHSLSQKL 706
E A R ++D I +KL
Sbjct: 309 ------KEATVAAERNTMKDSIGQEQRKL 331
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 27.5 bits (58), Expect = 0.47
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 500 EVARKLVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNL--KSLEVSEEKAMAS 661
EVAR +L DLE A + EL +R NL + +E++EE A +
Sbjct: 358 EVARDRMLQTADLEERSIAAAEHRTARAELSRAIRASKRNLFQELIEIAEENAFGA 413
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 27.1 bits (57), Expect = 0.61
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 650 PSPLRLPEISGCYQRHGAPPQAQR 579
P PL + E + C+QR+ A P+A R
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASR 865
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 26.2 bits (55), Expect = 1.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 344 KLSEASQAADE-SERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLV 520
K+ Q E + R+ E + E I+E L Q + ++ Y +R+
Sbjct: 672 KVKRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALER-YAAASREHD 730
Query: 521 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLE--VSEEKAMAS 661
L+EQ + EER + LE+ + L ++E ++E KA +S
Sbjct: 731 LLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKAKSS 779
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 442 GGSTVTGEAHRRGVGQEIRRGGAQACSYGAGPREGGG 552
GG G R G G RGG + G G R+GGG
Sbjct: 59 GGDDGYGGGGRGGRGG---RGGGRGRGRGRGGRDGGG 92
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 5.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A +L A + A+++ + N +A + Q+ ++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 515 LVLMEQDLERAEE 553
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 5.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A +L A + A+++ + N +A + Q+ ++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 515 LVLMEQDLERAEE 553
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 5.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A +L A + A+++ + N +A + Q+ ++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 515 LVLMEQDLERAEE 553
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 5.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A +L A + A+++ + N +A + Q+ ++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 515 LVLMEQDLERAEE 553
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 5.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 335 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 514
A +L A + A+++ + N +A + Q+ ++ AEE+ + R+
Sbjct: 1352 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 1411
Query: 515 LVLMEQDLERAEE 553
+V L+RAEE
Sbjct: 1412 IVNSRDLLQRAEE 1424
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.8 bits (49), Expect = 5.7
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 407 RTNMEDDRVAILEAQLSQAKLIAEESDKKYEE---VARKLVLMEQDLER 544
RT++ + V AQL A ++ +E ++Y E AR+ ++ ER
Sbjct: 1029 RTSLFEQGVLADNAQLRNADVLRQERLRRYNETRNAARRAATQQRQAER 1077
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 7.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 502 GGAQACSYGAGPREGGGTRRTKRLQN 579
GG + G+G GGG+ T+R N
Sbjct: 856 GGGSSGGGGSGGTSGGGSSTTRRDHN 881
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,918
Number of Sequences: 2352
Number of extensions: 14862
Number of successful extensions: 49
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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