Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2l05
         (201 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LNR8 Cluster: Aldehyde oxidase and xanthine dehydroge...    31   3.7  
UniRef50_Q3EDA9 Cluster: Uncharacterized protein At1g16830.1; n=...    31   4.9  
UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|R...    31   6.5  

>UniRef50_A6LNR8 Cluster: Aldehyde oxidase and xanthine
           dehydrogenase, molybdopterin binding; n=1; Thermosipho
           melanesiensis BI429|Rep: Aldehyde oxidase and xanthine
           dehydrogenase, molybdopterin binding - Thermosipho
           melanesiensis BI429
          Length = 754

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 69  YLVTCVVVTNFSTNLDLYV 125
           YL T  +VTNFSTNL+LYV
Sbjct: 182 YLETQGIVTNFSTNLELYV 200


>UniRef50_Q3EDA9 Cluster: Uncharacterized protein At1g16830.1; n=5;
           Magnoliophyta|Rep: Uncharacterized protein At1g16830.1 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 738

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 201 FFFWTFNTNVYFHCSKQFNRESLMIERIDRDW 106
           FFFW    N YFH  + F+    ++E++ R++
Sbjct: 188 FFFWCAKQNNYFHDDRAFDHMVGVVEKLTREY 219


>UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|Rep:
           Predicted hydrolase - Mycoplasma mobile
          Length = 604

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 116 IEIGRKIRYNDARDQVIIDNTH 51
           IEIGRK+ Y D  D V ID  H
Sbjct: 259 IEIGRKLDYIDVEDSVFIDKKH 280


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,246,181
Number of Sequences: 1657284
Number of extensions: 2388899
Number of successful extensions: 5348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5344
length of database: 575,637,011
effective HSP length: 46
effective length of database: 499,401,947
effective search space used: 9988038940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)