Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2l05
         (201 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.     27   8.4  
AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.        27   8.4  
AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens ...    27   8.4  

>BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 33  ITCY*FMCIIYDYLVTCVVVTNFST-NLDLYVRSLVILC*IVCYSENKRL 179
           + C   +C + D +V  +V        +DLY+R + ++  ++CY +  R+
Sbjct: 14  LPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLCYQKKCRV 63


>AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.
          Length = 689

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 33  ITCY*FMCIIYDYLVTCVVVTNFST-NLDLYVRSLVILC*IVCYSENKRL 179
           + C   +C + D +V  +V        +DLY+R + ++  ++CY +  R+
Sbjct: 438 LPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLCYQKKCRV 487


>AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13114 fis, clone NT2RP3002603. ).
          Length = 265

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 33  ITCY*FMCIIYDYLVTCVVVTNFST-NLDLYVRSLVILC*IVCYSENKRL 179
           + C   +C + D +V  +V        +DLY+R + ++  ++CY +  R+
Sbjct: 14  LPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLCYQKKCRV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,931,080
Number of Sequences: 237096
Number of extensions: 348912
Number of successful extensions: 539
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)