Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2l05
         (201 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   0.80 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   1.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   1.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   1.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   7.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   7.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    18   9.8  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 0.80
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 192 WTFNTNVYFHCSKQFNRESLMIERIDRDWSKNS-LQRRT*P 73
           W+F    +  CSK  +   + I++ DR W  +S L  RT P
Sbjct: 111 WSFAE--FKDCSKIVSAFKIAIDKFDRLWVLDSGLVNRTVP 149


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 192 WTFNTNVYFHCSKQFNRESLMIERIDRDWSKNS 94
           W+F    Y  CS   +   L I++ DR W  +S
Sbjct: 110 WSFAK--YDDCSGIVSASKLAIDKCDRLWVLDS 140


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 192 WTFNTNVYFHCSKQFNRESLMIERIDRDWSKNS 94
           W+F    Y  CS   +   L I++ DR W  +S
Sbjct: 110 WSFAK--YDDCSGIVSASKLAIDKCDRLWVLDS 140


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 192 WTFNTNVYFHCSKQFNRESLMIERIDRDWSKNS 94
           W+F    Y  CS   +   L I++ DR W  +S
Sbjct: 110 WSFAK--YDDCSGIVSASKLAIDKCDRLWVLDS 140


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 171 YFHCSKQFNRESLMIERIDRDWSKNS 94
           Y  CS   +   + I++ DR W  +S
Sbjct: 119 YKDCSGIVSAYKIAIDKFDRLWVLDS 144


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 171 YFHCSKQFNRESLMIERIDRDWSKNS 94
           Y  CS   +   + I++ DR W  +S
Sbjct: 119 YKDCSGIVSAYKIAIDKFDRLWILDS 144


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = -1

Query: 165 HCSKQFNRESLMIERIDRDWSKNS 94
           HC    N   L I   + DWS  +
Sbjct: 203 HCIIDENTTKLAIVVGEHDWSSKT 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,105
Number of Sequences: 438
Number of extensions: 997
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)