Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2k23
(725 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 2.4
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 9.6
AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein. 23 9.6
AY045760-2|AAK84943.1| 169|Anopheles gambiae D7-related 3 prote... 23 9.6
AJ133854-1|CAB39729.1| 169|Anopheles gambiae D7-related 3 prote... 23 9.6
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 9.6
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 25.0 bits (52), Expect = 2.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 216 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 317
+L+ E L G CN + K CGK HIR H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -3
Query: 642 GGTAQYSRHWRGGPLHAASQTHHVH 568
GG + H GG A HH H
Sbjct: 703 GGGGHHLSHHHGGAAAATGHHHHQH 727
>AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 86 FIFAVPVASRWPAPHGDLYKVTPQPRKK 3
F+ A+ + ++ P + YK+ P P K
Sbjct: 66 FVHALSIVAKTPQQWDEAYKLEPSPNCK 93
>AY045760-2|AAK84943.1| 169|Anopheles gambiae D7-related 3 protein
protein.
Length = 169
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1
Query: 542 YVDLLTSGELELGT 501
YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149
>AJ133854-1|CAB39729.1| 169|Anopheles gambiae D7-related 3 protein
protein.
Length = 169
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1
Query: 542 YVDLLTSGELELGT 501
YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.0 bits (47), Expect = 9.6
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 463 VTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASPMTAVLCSTA 642
++G R +RL S SP S +R + Q ++ CV+R+ +LCS+
Sbjct: 4 LSGKRPSGARLSI--SRGSPTGVYSVRRRWSLCQKLHFRDQVCCVQRSPPHWPYLLCSSC 61
Query: 643 RNM 651
M
Sbjct: 62 SAM 64
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,353
Number of Sequences: 2352
Number of extensions: 19304
Number of successful extensions: 42
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -