Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2k21
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.8  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   5.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.7  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 185 LETHSKRCKDKISRR*KTISQEIWLPRENLAWW 283
           L+T   +C DK  +  KT+ Q ++  +++  WW
Sbjct: 70  LKTSCAKCTDKQKQGAKTVIQHLYKNKQD--WW 100


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 460 LTPRIHDGILYNVLTGCR 407
           L+ R H G  YN L  CR
Sbjct: 83  LSCRFHQGASYNTLNTCR 100


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -2

Query: 331 LYSGIGSAFPSDLGKSPPRQIF--SW*PYLLTNRFLSA*YLVLTTFTVGFQTTLRILE 164
           ++  +G  + +   KS   + F   W P +L +  L A +L+LT     F+    I++
Sbjct: 142 MFDTLGGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKARFEAINNIID 199


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -2

Query: 331 LYSGIGSAFPSDLGKSPPRQIF--SW*PYLLTNRFLSA*YLVLTTFTVGFQTTLRILE 164
           ++  +G  + +   KS   + F   W P +L +  L A +L+LT     F+    I++
Sbjct: 142 MFDTLGGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKARFEAINNIID 199


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 625 FISLRTVVFYVDK*DTKY 678
           F+++ +VVF  DK  TKY
Sbjct: 9   FVAVLSVVFAADKYTTKY 26


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 189 KPTVNVVRTRYHADKKRLVRRY 254
           K  +N  +T+Y+ + K L R+Y
Sbjct: 182 KAKINTGKTQYNLNSKSLPRQY 203


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 625 FISLRTVVFYVDK*DTKY 678
           F+++ +VVF  DK  TKY
Sbjct: 9   FVAVVSVVFAADKYTTKY 26


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 324 EYRPDNPWSVRKA 362
           EYRPD+P S+  A
Sbjct: 107 EYRPDSPSSMHMA 119


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 537 KWKEIQKRLSFLYRKLNRK 593
           +W  + K   F+ +KLN +
Sbjct: 45  QWSSLNKNFQFIDKKLNNR 63


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 324 EYRPDNPWSVRKA 362
           EYRPD+P S+  A
Sbjct: 109 EYRPDSPSSMHMA 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,203
Number of Sequences: 336
Number of extensions: 3966
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)