Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2k09
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    27   0.11 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    27   0.11 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.19 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    27   0.19 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    27   0.19 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.19 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.3  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 430 SRTSAMTTCLRDLHKET-YGCHLCSSEFDRITALDRHL 540
           S++S++TT +R    E  Y C LC   F   + L +HL
Sbjct: 60  SQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHL 97



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 430 SRTSAMTTCLRDLH--KETYGCHLCSSEFDRITALDRHL 540
           S +S +T  LR +H  ++ Y C LC   F +   L+RH+
Sbjct: 88  SDSSTLTKHLR-IHSGEKPYECKLCLLRFSQSGNLNRHM 125



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 73  FSCSQCDFTAQFESALTMHRQLH 141
           F C  CD      S++T H + H
Sbjct: 50  FRCPVCDRRFSQSSSVTTHMRTH 72


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 430 SRTSAMTTCLRDLHKET-YGCHLCSSEFDRITALDRHL 540
           S++S++TT +R    E  Y C LC   F   + L +HL
Sbjct: 316 SQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHL 353



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 430 SRTSAMTTCLRDLH--KETYGCHLCSSEFDRITALDRHL 540
           S +S +T  LR +H  ++ Y C LC   F +   L+RH+
Sbjct: 344 SDSSTLTKHLR-IHSGEKPYECKLCLLRFSQSGNLNRHM 381



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 73  FSCSQCDFTAQFESALTMHRQLH 141
           F C  CD      S++T H + H
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTH 328


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 73  FSCSQCDFTAQFESALTMHRQLH 141
           F C++CD+T   +S L  H + H
Sbjct: 259 FQCNKCDYTCVNKSMLNSHMKSH 281



 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 64  IMAFSCSQCDFTAQFESALTMHRQLH 141
           I  F C QCDF A  +     H ++H
Sbjct: 199 IKTFKCKQCDFVAITKLEQWNHSKVH 224


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388 PSECTSKHLRIDSVSRTSAMTTCLRDLH--KETYGCHLCSSEFDRITALDRHL 540
           P EC   H R    +R   + T +R LH  +  Y C  C  +F ++  L RHL
Sbjct: 9   PFECQECHKRF---TRDHHLKTHMR-LHTGERPYRCEHCDRQFVQVANLRRHL 57


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 73  FSCSQCDFTAQFESALTMHRQLH 141
           F C++CD+T   +S L  H + H
Sbjct: 17  FQCNKCDYTCVNKSMLNSHMKSH 39


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388 PSECTSKHLRIDSVSRTSAMTTCLRDLH--KETYGCHLCSSEFDRITALDRHL 540
           P EC   H R    +R   + T +R LH  +  Y C  C  +F ++  L RHL
Sbjct: 162 PFECQECHKRF---TRDHHLKTHMR-LHTGERPYRCEHCDRQFVQVANLRRHL 210



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 481 YGCHLCSSEFDRITALDRHLL 543
           YGC  CS +F     L  H+L
Sbjct: 219 YGCEHCSMKFSDSNQLKAHVL 239


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 204 KSQDPEPNQQW*RKHEFQA 260
           K Q+P+P+Q   RKH + A
Sbjct: 97  KLQEPQPSQHCPRKHGYFA 115


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 586 LNKTKDCLNDEDSAILGIKQPYYKPP 663
           L+ TK+ L D   A+ G     +KPP
Sbjct: 333 LDPTKEKLYDAIEALYGDMLKQFKPP 358


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 340 HPEENDPLKTFNDISIPSECTSKHLRIDSVSRTSAMTTC 456
           H  +N   +   D+ IP+    KHL +  V       TC
Sbjct: 33  HEVDNQLKQMGCDLDIPNSVVQKHLILLMVLVNLIFNTC 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,413
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)