Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2k09
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 31 0.76
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 31 0.76
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 31 0.76
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 31 0.76
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical... 30 1.3
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 30 1.3
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z27078-3|CAA81585.1| 251|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70754-7|CAA94778.1| 228|Caenorhabditis elegans Hypothetical pr... 29 4.0
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical ... 29 4.0
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical p... 28 5.3
AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical ... 28 5.3
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.3
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 28 5.3
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81070-7|CAD30437.1| 608|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81070-6|CAB03000.1| 677|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 28 7.0
U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical pr... 28 7.0
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 28 7.0
U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical ... 28 7.0
AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical ... 28 7.0
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 27 9.3
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 27 9.3
M77697-8|ABB88245.1| 308|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTL 201
F CS C Q ++L HRQL H E ++ L + T+
Sbjct: 25 FVCSSCSQNFQHSASLNRHRQLMHSNEHTCMMCERALNQKETI 67
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 517 ITALDRHLL--NDHKISIEELLKLVLNKTKDCLNDEDSAILGIKQPYYKPPDEI 672
I+ L +HLL N +IEE +L+ N +DCL D +LG+ + P DEI
Sbjct: 1919 ISELCKHLLFTNQGIKTIEEWRELMSNVLRDCLIDGKDTVLGV---HITPDDEI 1969
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 517 ITALDRHLL--NDHKISIEELLKLVLNKTKDCLNDEDSAILGIKQPYYKPPDEI 672
I+ L +HLL N +IEE +L+ N +DCL D +LG+ + P DEI
Sbjct: 1919 ISELCKHLLFTNQGIKTIEEWRELMSNVLRDCLIDGKDTVLGV---HITPDDEI 1969
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 481 YGCHLCSSEFDRITALDRHLLNDHKISI 564
Y CHLC + AL RHL H++ I
Sbjct: 471 YTCHLCDRTYTTGFALGRHLTRQHRLQI 498
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 YLLSFKRLFLSFCGVFITIMA-FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLE 186
++L K L + G+ ++M+ CS CDF A H H +VP L
Sbjct: 690 HMLLNKHLDVGLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLY 749
Query: 187 KANTLPRAKILSPINN 234
+ LP ++P N+
Sbjct: 750 NSLNLPSFSHVAPDND 765
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 79 CSQCDFTAQFESALTMHRQLHHPTEDDV 162
CS CD+T++ E L H + H E+ +
Sbjct: 341 CSMCDYTSRTEGRLKKHMRESHTVEEQL 368
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 YLLSFKRLFLSFCGVFITIMA-FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLE 186
++L K L + G+ ++M+ CS CDF A H H +VP L
Sbjct: 712 HMLLNKHLDVGLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLY 771
Query: 187 KANTLPRAKILSPINN 234
+ LP ++P N+
Sbjct: 772 NSLNLPSFSHVAPDND 787
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 79 CSQCDFTAQFESALTMHRQLHHPTEDDV 162
CS CD+T++ E L H + H E+ +
Sbjct: 363 CSMCDYTSRTEGRLKKHMRESHTVEEQL 390
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 YLLSFKRLFLSFCGVFITIMA-FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLE 186
++L K L + G+ ++M+ CS CDF A H H +VP L
Sbjct: 712 HMLLNKHLDVGLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLY 771
Query: 187 KANTLPRAKILSPINN 234
+ LP ++P N+
Sbjct: 772 NSLNLPSFSHVAPDND 787
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 79 CSQCDFTAQFESALTMHRQLHHPTEDDV 162
CS CD+T++ E L H + H E+ +
Sbjct: 363 CSMCDYTSRTEGRLKKHMRESHTVEEQL 390
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +1
Query: 349 ENDPLKTFNDISIPSE-CTSKHLRIDSVS-----RTSAMTTCLRDLHKETYGCHLCSSEF 510
EN P F I S CT D ++ +T+A L K Y C+LCSS+F
Sbjct: 34 ENTPEMVFGSFPIHSGFCTQVVTHTDPMNNNNQPKTNANGRALAADRKRPYPCNLCSSKF 93
Query: 511 DRITALDRHLLNDH 552
L+ H N H
Sbjct: 94 GSKMELEEH-QNSH 106
>AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical
protein Y73F8A.33 protein.
Length = 874
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 67 MAFSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKA 192
+A+ C+ C T ++ L HR+ HP ++P D P++ A
Sbjct: 54 VAWECTTCGLTLPSKNGLVTHRRRKHPKVTNLP--DAPVDPA 93
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 466 LHKETYGCHLCSSEFDRITALDRHLLNDHKISIEELLKLVLNKTKDCLNDEDSA 627
L + C C +EF+ LD H+ +H + EL + K K L E+S+
Sbjct: 195 LKSDDLECEQCGNEFENELDLDHHIRREHSTDVYEL--VFCPKCKKVLTLEESS 246
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHH--PTEDDV 162
F CS+C F S +T H ++H+ T+D+V
Sbjct: 833 FQCSECTFNVNSASCMTQHLRIHNIDVTDDNV 864
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTLPRAKILSPINNGNEN-T 249
+ C CD++ + + H HH D L + + R + P NGN+ T
Sbjct: 957 YRCKLCDYSDDTKEVVGFHETKHH--NIDHLTLANVVRNISCNMRNGFIQPSLNGNQTPT 1014
Query: 250 NFKLPGRTSSA 282
++K+ R+ A
Sbjct: 1015 SYKIAQRSGGA 1025
>Z27078-3|CAA81585.1| 251|Caenorhabditis elegans Hypothetical
protein K04H4.5 protein.
Length = 251
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +1
Query: 247 TNFKLPGRTS-SATRLFDRLRAKIYKSRTLFSHPEENDPLKTFNDISIPSECTSKHLRID 423
+NF+LP TS AT ++ KS+ + E DP K + E + D
Sbjct: 134 SNFQLPKMTSIEATENVFKINGAHEKSQYVLM--ENEDPNKVNSPKKTGLESLISYTASD 191
Query: 424 SVSRTSAMTTCLRDLHKETYGCHLCSSEFDR 516
S ++ ++CL +GC +S +DR
Sbjct: 192 VTSTIASESSCLTATLGPAFGCLPITSTYDR 222
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 79 CSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTLPRAKI 216
C C++ S L H +HH TE + + L P+A +
Sbjct: 1261 CPSCEYFCHVSSELAFHMSVHHLTEPNARETISYLHMGLVPPKATV 1306
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLH 141
F+C CDF+A +LT H +H
Sbjct: 141 FACELCDFSASTLKSLTHHNNIH 163
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 79 CSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTLPRAKI 216
C C++ S L H +HH TE + + L P+A +
Sbjct: 1263 CPSCEYFCHVSSELAFHMSVHHLTEPNARETISYLHMGLVPPKATV 1308
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLH 141
F+C CDF+A +LT H +H
Sbjct: 141 FACELCDFSASTLKSLTHHNNIH 163
>Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical
protein F13G3.1 protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 481 YGCHLCSSEFDRITALDRHLLNDHKIS 561
Y C LCS E +R++ L+ H+ + H S
Sbjct: 180 YRCQLCSFEDERVSVLNSHVSHLHNTS 206
>Z70754-7|CAA94778.1| 228|Caenorhabditis elegans Hypothetical
protein F58E6.8 protein.
Length = 228
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 385 IPSECTSKHLRIDSVSRTS-AMTTCLRDLHKETYGCHLCSSEFDRITALDRHLLN 546
IPS TS HLR+D +S + A+ DL E + +SE + L + +N
Sbjct: 17 IPSISTSGHLRLDIISSNNCALCLISEDLQSEVIHLKIGNSETYNVQTLAKVSIN 71
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 430 SRTSAMTTCLRDLHKETYGCHLCSSEFDRITALDRH--LLNDHKISIEELLKLV 585
SR+ T + ++TY C CS+++ + L H L+D K S + L+KL+
Sbjct: 195 SRSIVKETKYEEPEEKTYPCDKCSAKYKSLAGLSYHQSYLHDQK-SSQPLVKLL 247
>AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical
protein F36F12.8 protein.
Length = 272
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTLPRAKILSPINNGNENTN 252
++C C++T + ALT H + E P P+ K+ P + + SPI N
Sbjct: 96 YTCGCCNWTFSNKKALTEHAKAIQ--ETGAPGDANPIAKSGNSPGSLLKSPIQRAGFKLN 153
Query: 253 FKLPGRTSSAT 285
L S +T
Sbjct: 154 RLLNKSLSPST 164
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKPLEKANTL 201
F C+ C Q ++L HR+L H E D+ L T+
Sbjct: 25 FICASCGQHFQHNASLNRHRRLLHGNEHTCMMCDRKLNAKETI 67
>Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 289 LFDRLRAKIYKSRTLFSHPEENDPLKTFNDISIPSECTSKHLRIDSVSRTSAMTTCLRDL 468
L + K K ++ PE DP+ +S + K ++D VS S++ + L++L
Sbjct: 489 LAQTISVKDLKQGKMYKKPESKDPVSKKRKVSENAPSVPKKQKLD-VSEKSSVESLLKNL 547
Query: 469 HKET 480
K++
Sbjct: 548 KKKS 551
>AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 289 LFDRLRAKIYKSRTLFSHPEENDPLKTFNDISIPSECTSKHLRIDSVSRTSAMTTCLRDL 468
L + K K ++ PE DP+ +S + K ++D VS S++ + L++L
Sbjct: 489 LAQTISVKDLKQGKMYKKPESKDPVSKKRKVSENAPSVPKKQKLD-VSEKSSVESLLKNL 547
Query: 469 HKET 480
K++
Sbjct: 548 KKKS 551
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 61 TIMAFSCSQCDFTAQFESALTMHRQLHHPTEDDVPQLDKP 180
T + F C+ C++ + + +L+ H++ HP + KP
Sbjct: 17 TNIDFQCNLCEYVGKSDRSLSAHKRHRHPRPEGQEDDKKP 56
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLH 141
FSC +C T +++S L HR+ H
Sbjct: 249 FSCDRCSRTFKYQSKLDEHRRTH 271
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 112 SALTMHRQLHHPTEDDVPQLDKPLEKANTLPRAKILSPINNGNENT 249
S+ + + L P+ DD P +PL K N L + N T
Sbjct: 37 SSSSKRKNLRKPSTDDTPSSSEPLSKKNRLDSTETAEEDNTRRRRT 82
>Z81070-7|CAD30437.1| 608|Caenorhabditis elegans Hypothetical
protein F26E4.7b protein.
Length = 608
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 508 FDRITA-LDRHLLNDHKISIEELLKLVLNKTKDCLNDE 618
FDRI ++R LL D +I +E++LKL + K+ +DE
Sbjct: 319 FDRIPEQIERRLLRD-RIWLEQILKLHIVPAKELTSDE 355
>Z81070-6|CAB03000.1| 677|Caenorhabditis elegans Hypothetical
protein F26E4.7a protein.
Length = 677
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 508 FDRITA-LDRHLLNDHKISIEELLKLVLNKTKDCLNDE 618
FDRI ++R LL D +I +E++LKL + K+ +DE
Sbjct: 388 FDRIPEQIERRLLRD-RIWLEQILKLHIVPAKELTSDE 424
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 331 LFSHPEENDPLKTFNDISIPSECTSK-----HLRIDSVSRTSAMTTCLRDLHKETYGCHL 495
+FS E+ + +K +D+ I S K HL ID+ S++ ++ R + K+TY H
Sbjct: 278 VFSSLEDIEGVKKVHDLRIWSLTMDKIALSVHLEIDANSQSQSILRETRKMLKQTYNVHE 337
Query: 496 CSSEFDRITA 525
+ + + A
Sbjct: 338 ITIQIEEFGA 347
>U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical
protein C27A2.7 protein.
Length = 216
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 436 TSAMTTCLRDLHKETYGCHLCSSEFDRITALDRHL 540
T A+ +R H Y CH C + F R L HL
Sbjct: 173 TKALNAHVRT-HTRPYACHRCDASFARKNDLQSHL 206
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 460 RDLHKETYG--CHLCSSEFDRITALDRHLLNDHKISIEEL 573
+ LHK C +C + ++ L H+LN+H ++++
Sbjct: 136 KTLHKACVSSKCDICGKIYSAVSVLAEHMLNEHNRYLDQI 175
>U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical
protein C30G4.7 protein.
Length = 114
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 96 HCAIREC-TNNAPTTSPPYRGRRTST*QATGESQHITKSQDPEPN 227
HCA+ EC N+ PT SP Y R + ++ S + + P N
Sbjct: 3 HCAVVECAVNHVPTYSPHYGISRGCSPSSSSGSCYSVAASPPAHN 47
>AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical
protein Y71A12B.8 protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 61 TIMAFSCSQCDFTAQFESALTMHRQLHHPTEDDV 162
T+ AF C +C + + S L +H L H ++++
Sbjct: 222 TLEAFHCDKCSYASGSISELNVHHYLKHGKKEEL 255
>AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2b protein.
Length = 588
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +1
Query: 181 LEKANTLPRAKILSPINNGNENTNFKLPGRTSSATRLFDRLRAKIYKSRTLFSHPEENDP 360
++ ++TL R + L+P NNGN N P +++ T L R + + + S P +
Sbjct: 358 VKHSSTLARLQKLTPPNNGNTN-----PILSTTTTPLSSRTTRSVLRVHNVNSVPRPSVQ 412
Query: 361 LKTFNDISIPSECTSK 408
T + S+ + T++
Sbjct: 413 NSTMSKSSVTANQTNR 428
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 451 TCLRDLHKETYGCHLCSSEFDRITALDRHL 540
+C D + + C++CS F R L RH+
Sbjct: 359 SCTLDDASKVHKCNMCSKSFSRSDMLTRHM 388
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 481 YGCHLCSSEFDRITALDRHLLNDHKISIEEL 573
Y CH C+ +F HL H+ SI++L
Sbjct: 429 YSCHTCNQKFHARDRFAVHLSKYHQTSIKDL 459
>M77697-8|ABB88245.1| 308|Caenorhabditis elegans Hypothetical
protein B0303.16 protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 9 LFTLI*KTFFIVLW--CFYNNHGIQLFPVRLHCAIRECTNNAPTTS 140
L T I I+L+ FY H +F +++ C CT++A T S
Sbjct: 101 LMTQIIPKISIILFFLAFYLTHASSMFYIKILCRSGNCTDSASTLS 146
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 472 KETYGCHLCSSEFDRITALDRHL 540
KETY C++C F + L++H+
Sbjct: 549 KETYHCYICRMPFSVHSTLEKHM 571
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,377,972
Number of Sequences: 27780
Number of extensions: 329250
Number of successful extensions: 1285
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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