Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2k09
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 27 0.12
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 27 0.22
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 3.5
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 23 3.5
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 22 6.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.2
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 21 8.2
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.5 bits (58), Expect = 0.12
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 451 TCLRDLHKETYGCHLCSSEFDRITALDRHLLNDHK 555
T L ++ ++TY C LC FD+ HL + K
Sbjct: 52 TPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGK 86
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLH 141
+ C C + + L++HR++H
Sbjct: 120 YQCEYCSKSFSVKENLSVHRRIH 142
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 26.6 bits (56), Expect = 0.22
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 388 PSECTSKHLRIDSVSRTSAMTTCLRDLH--KETYGCHLCSSEFDRITALDRHL 540
P EC H R +R + T +R LH ++ Y C C +F ++ L RHL
Sbjct: 9 PFECPECHKRF---TRDHHLKTHMR-LHTGEKPYHCSHCDRQFVQVANLRRHL 57
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 487 CHLCSSEFDRITALDRHL 540
CHLC F R L H+
Sbjct: 45 CHLCGKAFSRPWLLQGHI 62
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 70 AFSCSQCDFTAQFESALTMHRQLH 141
+FSC C+ AL MH + H
Sbjct: 16 SFSCKYCEKVYVSLGALKMHIRTH 39
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 472 KETYGCHLCSSEFDRITALDRHLLNDHKISIEE 570
K+ + C LC +L RH+ + H EE
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHAERQEE 35
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLH 141
F C +C ++ +S L H + H
Sbjct: 17 FKCEKCSYSCVNKSMLNSHLKSH 39
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +3
Query: 141 PPYRGRRTST*QATGESQHITKSQDPEPNQQW*RKHE 251
P Y+ RT+ +S+H + ++ E N+ + +H+
Sbjct: 157 PRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHK 193
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 427 VSRTSAMTTCLRDLHKET 480
V +TSA+TT L L K T
Sbjct: 1167 VRKTSALTTVLTGLRKYT 1184
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 174 QATGESQHITKSQDPEPNQQ 233
Q ++QH+ +Q P+ QQ
Sbjct: 426 QQQQQTQHVINAQQPQQQQQ 445
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 427 VSRTSAMTTCLRDLHKET 480
V +TSA+TT L L K T
Sbjct: 1163 VRKTSALTTVLTGLRKYT 1180
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 73 FSCSQCDFTAQFESALTMHRQLHH 144
+ C C+ + +++LT H+ L H
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSLQH 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,224
Number of Sequences: 438
Number of extensions: 3715
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -