Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j21
         (349 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0808 + 32134765-32136570                                         29   0.76 
03_06_0775 - 36174098-36174204,36174540-36174594,36174690-361747...    27   3.1  
05_03_0581 + 15736732-15736778,15737021-15737846                       27   4.0  
12_01_0272 + 1985348-1986036,1986142-1988020                           27   5.3  
11_01_0271 + 2039100-2041760                                           27   5.3  
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144...    27   5.3  
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179...    26   7.1  
02_05_0709 - 31111834-31111887,31111910-31112134                       26   9.3  
01_05_0484 - 22621614-22621676,22621798-22621911,22622006-226224...    26   9.3  

>01_06_0808 + 32134765-32136570
          Length = 601

 Score = 29.5 bits (63), Expect = 0.76
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 13  YETDGGRHYIKSDGRSHRQQYRRYHP 90
           Y T  GR+Y + DG  H ++Y +Y P
Sbjct: 558 YRTFTGRYYSRLDGTRHLERYIKYKP 583


>03_06_0775 -
           36174098-36174204,36174540-36174594,36174690-36174741,
           36174947-36175028,36175110-36175204,36175339-36175727
          Length = 259

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 2   KKHIMKPTAADIISRVTGGRTGNNIVDIIQ 91
           ++ ++KP  A +    TGGR G+ + D+IQ
Sbjct: 52  QEFVLKPVQATLGPNSTGGRGGSPLPDVIQ 81


>05_03_0581 + 15736732-15736778,15737021-15737846
          Length = 290

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 155 LAIGFYLQIGQVDRLQSASCWL 90
           +A+GFYL    VD ++ A+ WL
Sbjct: 228 VALGFYLSTALVDAVRRATAWL 249


>12_01_0272 + 1985348-1986036,1986142-1988020
          Length = 855

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 19  TDGGRHYIKSDGRSHRQQYRRY 84
           TDG RHY+  D   H   +RRY
Sbjct: 363 TDGYRHYLAGDPVLHITYHRRY 384


>11_01_0271 + 2039100-2041760
          Length = 886

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 19  TDGGRHYIKSDGRSHRQQYRRY 84
           TDG RHY+  D   H   +RRY
Sbjct: 398 TDGYRHYLAGDPVLHITYHRRY 419


>05_01_0201 -
           1441063-1443836,1444658-1445758,1446367-1447179,
           1447386-1447440
          Length = 1580

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 20  PTAADIISRVTGGRTGNNI-VDIIQANNSPTE 112
           P AAD+I     G+TG+ I VDI Q   +P +
Sbjct: 475 PAAADVIPSDPCGKTGSGIDVDIEQREENPCQ 506


>02_05_1263 +
           35316083-35316185,35317167-35317220,35317665-35317903,
           35317989-35318089,35318390-35318583,35318885-35319003,
           35319624-35319749,35320081-35320142,35320265-35320348,
           35320580-35320664
          Length = 388

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 56  GRTGNNIVDIIQANNSPTEGDQLGQFV 136
           GR G NI +IIQA+ +  +    G F+
Sbjct: 301 GRAGRNITEIIQASGARIKISDRGDFI 327


>02_05_0709 - 31111834-31111887,31111910-31112134
          Length = 92

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 ICFSSVRVFNFCYDCVILYVIGC 231
           + FSS R F  CYD + + ++ C
Sbjct: 29  VIFSSCRFFERCYDALEMELLAC 51


>01_05_0484 -
           22621614-22621676,22621798-22621911,22622006-22622453,
           22623052-22623179,22623747-22623821,22623954-22624040
          Length = 304

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 46  SDGRSHRQQYRRYHPSQQLAD 108
           +DG+ HR + + YH SQ+ A+
Sbjct: 113 ADGKKHRAKAKAYHASQKQAN 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,914,848
Number of Sequences: 37544
Number of extensions: 103047
Number of successful extensions: 284
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)