Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2j19
(723 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69; Euk... 343 3e-93
UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;... 245 8e-64
UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1; ... 229 4e-59
UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n... 221 2e-56
UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=... 198 9e-50
UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2; ... 187 3e-46
UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3; Cryptosporidium|... 183 5e-45
UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1; ... 175 1e-42
UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 140 2e-32
UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1; Trichom... 137 3e-31
UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1; ... 126 6e-28
UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit ... 107 2e-26
UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;... 104 2e-21
UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n... 103 4e-21
UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;... 88 2e-16
UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lambli... 80 5e-14
UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6; Sa... 68 3e-10
UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3; ... 66 8e-10
UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3; ... 58 2e-07
UniRef50_Q6E6H6 Cluster: Spliceosome-associated protein 62; n=1;... 51 3e-05
UniRef50_UPI000065ED29 Cluster: zinc finger, matrin type 4; n=3;... 39 0.11
UniRef50_Q4SKX5 Cluster: Chromosome 17 SCAF14563, whole genome s... 38 0.33
UniRef50_UPI00015554D6 Cluster: PREDICTED: hypothetical protein,... 34 3.1
UniRef50_Q2NBA3 Cluster: Carboxynorspermidine decarboxylase; n=4... 34 4.1
UniRef50_UPI0000F2B9BF Cluster: PREDICTED: hypothetical protein;... 33 7.1
UniRef50_Q4U9S8 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
UniRef50_A7RJ77 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.4
UniRef50_P17041 Cluster: Zinc finger protein 32; n=18; Eutheria|... 33 9.4
>UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69;
Eukaryota|Rep: Splicing factor 3A subunit 2 - Homo
sapiens (Human)
Length = 464
Score = 343 bits (843), Expect = 3e-93
Identities = 156/197 (79%), Positives = 169/197 (85%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDPYFMKNHLGSYECKLCL
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL 60
Query: 312 TLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYRVT 491
TLHNNEGSYLAHTQGKKHQ PEK ++E KKFVKIGRPGY+VT
Sbjct: 61 TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT 120
Query: 492 KQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIA 671
KQ+D E GQQSLLFQ+DYPEIAEG++PRHRFMSAYEQ+IEPPDRRWQYLL AAEPYETIA
Sbjct: 121 KQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA 180
Query: 672 FKVPSREVEKHDSKFWT 722
FKVPSRE++K + KFWT
Sbjct: 181 FKVPSREIDKAEGKFWT 197
>UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;
n=11; Pezizomycotina|Rep: Splicing factor 3a subunit 2,
putative - Aspergillus clavatus
Length = 272
Score = 245 bits (600), Expect = 8e-64
Identities = 116/202 (57%), Positives = 146/202 (72%), Gaps = 5/202 (2%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
MD+QNR G K GGGGVAS S +N DRRERLR+LALETIDL+KDPYF KNH+GS+EC+LCL
Sbjct: 35 MDYQNRAGSKFGGGGVASHSATNADRRERLRKLALETIDLDKDPYFFKNHVGSFECRLCL 94
Query: 312 TLHNNEGSYLAHTQGKKHQ---XXXXXXXXXXXXXXXXXXXPEKPRIEPKK-FVKIGRPG 479
T+H N+GSYLAHTQG+KHQ P ++ KK +KIGRPG
Sbjct: 95 TVHQNDGSYLAHTQGRKHQTNLARRAAREQREGKNQDPSMLPGAMGVQVKKQTIKIGRPG 154
Query: 480 YRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKI-EPPDRRWQYLLFAAEP 656
Y++TK +DP T Q LLFQ+ Y EI GV PR RFMSA+EQK+ EPPD+ +QYL+ AAEP
Sbjct: 155 YKITKIRDPLTRQLGLLFQLQYQEITPGVTPRVRFMSAFEQKVEEPPDKNFQYLVVAAEP 214
Query: 657 YETIAFKVPSREVEKHDSKFWT 722
Y+T FK+ +RE+++ D ++WT
Sbjct: 215 YQTCGFKLQAREIDRRDGRYWT 236
>UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 313
Score = 229 bits (561), Expect = 4e-59
Identities = 115/203 (56%), Positives = 140/203 (68%), Gaps = 10/203 (4%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
MDF +R G K GGG+A SESN DRR+RLR+LALETIDL KDPY +KNHLG EC+LCL
Sbjct: 77 MDFSSRGGNK--GGGIAGASESNVDRRDRLRKLALETIDLAKDPYLLKNHLGGLECRLCL 134
Query: 312 TLHNNEGSYLAHTQGKKHQ-----XXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRP 476
TLH NEGSYLAHTQGKKHQ + K+FVKIGRP
Sbjct: 135 TLHTNEGSYLAHTQGKKHQTNLARRAAREAKENAYDSNKLITASAAESVPKKQFVKIGRP 194
Query: 477 GYRVTKQKDP-----ETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLL 641
GY+V+K ++P E G+ LLFQ+ PEI +GV+P HRFM ++EQKIE PDR +QYL+
Sbjct: 195 GYKVSKVREPLLEGGEGGRLGLLFQISLPEIKQGVMPMHRFMGSFEQKIETPDRNYQYLV 254
Query: 642 FAAEPYETIAFKVPSREVEKHDS 710
AAEPYETIAFK+ SRE+++ D+
Sbjct: 255 VAAEPYETIAFKLQSREIDRKDT 277
>UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n=5;
Plasmodium|Rep: Splicing factor 3a subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 233
Score = 221 bits (539), Expect = 2e-56
Identities = 103/196 (52%), Positives = 138/196 (70%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
MDFQNR G KTG G S + N++RRERL+QLALE ID+ KDPY +KN++G +ECKLCL
Sbjct: 1 MDFQNRVGHKTGSGMPLSREDINQERRERLKQLALENIDITKDPYILKNNVGMFECKLCL 60
Query: 312 TLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYRVT 491
TLHNNE SYL HTQGKKHQ KP EP+K VKIG+P Y VT
Sbjct: 61 TLHNNESSYLCHTQGKKHQMNLAQRLLKEKNEMTTNRL-NKPVSEPRKIVKIGKPRYDVT 119
Query: 492 KQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIA 671
+ ++ + Q +LF++ +P I E P+ RFMS++EQKIE PD+++QYLLFAAEPYETIA
Sbjct: 120 RVRN-KKNQLGILFELSFPNIKENTKPKFRFMSSFEQKIEAPDKKYQYLLFAAEPYETIA 178
Query: 672 FKVPSREVEKHDSKFW 719
FK+P+ ++++++ ++
Sbjct: 179 FKIPNIDIDENEGFYY 194
>UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3a
subunit 2 - Entamoeba histolytica HM-1:IMSS
Length = 218
Score = 198 bits (484), Expect = 9e-50
Identities = 94/188 (50%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Frame = +3
Query: 138 FQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTL 317
F G K G GG+A+ +E+ R+ERL+QLALE IDL+KDPYF K H+G+Y+CKLCLT
Sbjct: 2 FGREHGSKPGSGGLATLAETAAARKERLKQLALERIDLSKDPYFYKTHVGTYQCKLCLTT 61
Query: 318 HNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEK-PRIEPKKFVKIGRPGYRVTK 494
H E +YLAHTQGK+HQ P++ + F KIG PG+ +TK
Sbjct: 62 HLTEANYLAHTQGKRHQQNLRARELKEMKMHDVQENNTAIPKVPIRYFEKIGTPGFSITK 121
Query: 495 QKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAF 674
Q D T Q+SL V+ P+IA GVIP + M A+EQ +EPPD +QYL+ AAEPY++IAF
Sbjct: 122 QIDSTTHQKSLAITVNLPDIANGVIPLFKIMGAFEQHVEPPDNNYQYLIIAAEPYQSIAF 181
Query: 675 KVPSREVE 698
K+P+ EVE
Sbjct: 182 KIPNMEVE 189
>UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 352
Score = 187 bits (455), Expect = 3e-46
Identities = 84/146 (57%), Positives = 103/146 (70%)
Frame = +3
Query: 282 LGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFV 461
+ SYECKLCLTLHNNEG+YLAHTQGK+HQ P K + P+K V
Sbjct: 79 VSSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKFAPRKSV 138
Query: 462 KIGRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLL 641
KIGRPGY+VTKQ DP+ Q S LF++ YPEI E PRHRFM++YEQK+E D+++QYLL
Sbjct: 139 KIGRPGYQVTKQYDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLL 198
Query: 642 FAAEPYETIAFKVPSREVEKHDSKFW 719
FAAEPYE I FK+PS E++K KF+
Sbjct: 199 FAAEPYEIIGFKIPSAEIDKSADKFF 224
>UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3;
Cryptosporidium|Rep: F11a10.2 protein - Cryptosporidium
hominis
Length = 216
Score = 183 bits (445), Expect = 5e-45
Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 3/199 (1%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
MD++NR G KTG G +AS + +RRERLR+LALE+IDL+KDPY+MKNHLG EC+LC
Sbjct: 1 MDYENRGGHKTGSGALASSQDIAIERRERLRRLALESIDLSKDPYYMKNHLGQVECRLCS 60
Query: 312 TLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKK--FVKIGRPGYR 485
T+H NEGSYL+HTQG+KHQ P+ E K +IG+P Y+
Sbjct: 61 TIHTNEGSYLSHTQGRKHQ-TNLAYRASKEKNLKAVVKPQAENTEQAKPRAPRIGQPKYK 119
Query: 486 VTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYET 665
V+K ++ TG + + + EI E +P +R MS +EQK+E P+ ++QYL AEPY T
Sbjct: 120 VSKHREGSTGTNCVYCKFYFQEILEDHVPGYRIMSCWEQKVEKPNPKYQYLFVGAEPYNT 179
Query: 666 IAFKVPSRE-VEKHDSKFW 719
I ++P+ E +++ +W
Sbjct: 180 IGIRIPNIELIKQRTQTYW 198
>UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 427
Score = 175 bits (425), Expect = 1e-42
Identities = 94/190 (49%), Positives = 118/190 (62%)
Frame = +3
Query: 153 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEG 332
G K G GG AS DRRERLR+LALETIDL KDPYFM+NHLG + H G
Sbjct: 6 GSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGR---AIIWPTHKGRG 62
Query: 333 SYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYRVTKQKDPET 512
+ + E+ ++ +KIGRPGYRVTKQ DPET
Sbjct: 63 IRRIWPRELLVRPKRRLRSHSPTSAKSPYARQER-FVQLGLRIKIGRPGYRVTKQFDPET 121
Query: 513 GQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSRE 692
Q+SLLFQ++YPEI + PRHRFMS++EQ+++ D+R+QYLLFAAEPYE IAFKVPS E
Sbjct: 122 KQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFKVPSTE 181
Query: 693 VEKHDSKFWT 722
++K KF++
Sbjct: 182 IDKSTPKFFS 191
>UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 238
Score = 140 bits (340), Expect = 2e-32
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 9/199 (4%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQL-ALETIDLNKDPYFMKNHLGSYECKLC 308
MD+ R K G GGVA E+N R+R+++L A + +DL+ DPY +NHLG EC+LC
Sbjct: 1 MDYSGRVNSKKGAGGVAGAEETNVHTRQRIKELLATQVLDLDNDPYVFRNHLGLLECRLC 60
Query: 309 LTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI-------EPKKFVKI 467
LT H +E SY++H GKKH+ K + + + K+
Sbjct: 61 LTTHVSELSYISHLGGKKHRMGLEKRRALDEKYSQNRSLNTKINLIVSITNTAKRSWTKV 120
Query: 468 GRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFA 647
G+P Y++TK +DPET Q+ LL + YP+I P RFMS YE QYL+ +
Sbjct: 121 GKPAYKLTKIRDPETFQKGLLVDIKYPKITVEE-PFFRFMSYYELSEATDPSNLQYLVIS 179
Query: 648 AEPYETIAFKVPS-REVEK 701
AEPYE I F +P+ +E++K
Sbjct: 180 AEPYENICFIIPNDKEIDK 198
>UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1;
Trichomonas vaginalis G3|Rep: Splicing factor, putative
- Trichomonas vaginalis G3
Length = 219
Score = 137 bits (331), Expect = 3e-31
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Frame = +3
Query: 153 GGKTGGG-GVASWSE--SNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHN 323
GG GG G ++E S R RL+ L T++L D Y M+N G ECKLC T H
Sbjct: 4 GGPIGGKHGAGEYNEQLSKIARANRLQTLTGSTVNLENDQYLMRNQNGLLECKLCCTTHK 63
Query: 324 NEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPE---KPRIEP-KKFVKIGRPGYRVT 491
E SYL HT GK HQ + +++P K +KIG P + V
Sbjct: 64 TEASYLNHTYGKTHQRNLERRRITLARKEAIAGGIRSGTQVKVDPAKNTLKIGDPSFEVI 123
Query: 492 KQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIA 671
K++D TG ++L ++ YP+I + P++R MS YEQ +EPPD +YLLFAA PY T+
Sbjct: 124 KKRDITTGNLTILVELGYPDIKKYTSPKYRIMSTYEQTVEPPDPNHKYLLFAAIPYNTVC 183
Query: 672 FKVPSREV 695
FK+P+ +
Sbjct: 184 FKIPNMNI 191
>UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 218
Score = 126 bits (304), Expect = 6e-28
Identities = 72/199 (36%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRER--LRQLALETIDLNKDPYFMKNHLGSYECKL 305
M + PG + GG V S R + E + +KDPYF KNH+ +
Sbjct: 1 MSAETAPGFQVSGGRVVSPHSQQRMQTEESVCGSSRSRRLTSDKDPYFFKNHVEEFR--- 57
Query: 306 CLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYR 485
N LA K+ + K +KIGRPGYR
Sbjct: 58 ----EENIRHNLARRAAKEQREGKRDDASQAGLLAGVQVK--------KNTLKIGRPGYR 105
Query: 486 VTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYET 665
+TK +DP + Q LLFQ +P+I GV+PR RFMSAYEQ++E D +QYL+ A EPYET
Sbjct: 106 ITKVRDPMSRQNGLLFQFQFPDITTGVVPRVRFMSAYEQRVEEADPNYQYLIVAGEPYET 165
Query: 666 IAFKVPSREVEKHDSKFWT 722
+A K+ +RE+++ + KFWT
Sbjct: 166 VAVKLQAREIDRREGKFWT 184
>UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit
Sap62; n=3; Saccharomycetales|Rep: Potential splicing
factor SF3A subunit Sap62 - Candida albicans (Yeast)
Length = 256
Score = 107 bits (258), Expect(2) = 2e-26
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQL-ALETIDLNKDPYFMKNHLGSYECKLC 308
MD+ R K G GG+AS + N ++R+++L + +D++ DPY +NHLG ECKLC
Sbjct: 1 MDYSGRVNSKKGAGGIASNEDINIQTKQRVQELLSTHVLDIDNDPYVFRNHLGMLECKLC 60
Query: 309 LTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPR-------IEPKKFVKI 467
LT H NE SY++H G+KH + IE + + KI
Sbjct: 61 LTTHINESSYISHLGGRKHHLNLERRRILDEKQNKSREHQLSSQNILSINNIEKRSWKKI 120
Query: 468 GRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYE 599
G+P Y++TK +DPET + +L + P+I P R MS YE
Sbjct: 121 GKPIYKITKVRDPETLRTGILVNIKLPKITVKE-PMFRIMSYYE 163
Score = 34.3 bits (75), Expect(2) = 2e-26
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +3
Query: 618 DRRWQYLLFAAEPYETIAFKVPSR-EVEK 701
D ++QYL+ +AEPY+ IA +P++ E++K
Sbjct: 198 DNKYQYLVVSAEPYDNIAIVIPNKHEIDK 226
>UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3A subunit
2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 202
Score = 104 bits (250), Expect = 2e-21
Identities = 56/169 (33%), Positives = 93/169 (55%)
Frame = +3
Query: 210 RERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXX 389
RE L++ A+E DL DP++++ ++CKLCLT+H +E SYLAHTQGK+H
Sbjct: 22 REILKKRAIELFDLKDDPFYIRLD-NKFKCKLCLTMHRSESSYLAHTQGKRHN--KNIKK 78
Query: 390 XXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVI 569
+ + ++ + +P Y+VTK T ++ + +V Y +
Sbjct: 79 RNLAVDNKNIIQTDHSFFDNQR--NLSKPAYKVTKAYCKITHKKIIFIEVIYEYNLPEDV 136
Query: 570 PRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKF 716
P +R ++ YEQ IE PD +QYLL A+ Y TI FK+P+ ++ ++++F
Sbjct: 137 PDYRILTTYEQSIEKPDNNYQYLLVASPNYVTICFKIPNLLID-YENQF 184
>UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n=1;
Mus musculus|Rep: UPI0000565504 UniRef100 entry - Mus
musculus
Length = 354
Score = 103 bits (247), Expect = 4e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYE--CKL 305
M+FQ+ PGGKTG GGVAS S D RERL+QL LETI++NKD FMK + ++ KL
Sbjct: 1 MNFQHPPGGKTGSGGVAS---SKLDWRERLQQLTLETININKDLNFMKKNFMTWNPRSKL 57
Query: 306 CLTLHNNEGSYLAHTQGKKHQ 368
CLTLHNNEGSYLAH QG KHQ
Sbjct: 58 CLTLHNNEGSYLAHIQGNKHQ 78
>UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;
Encephalitozoon cuniculi|Rep: SPLICEOSOME-ASSOCIATED
PROTEIN 62 - Encephalitozoon cuniculi
Length = 185
Score = 87.8 bits (208), Expect = 2e-16
Identities = 60/185 (32%), Positives = 89/185 (48%)
Frame = +3
Query: 147 RPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNN 326
R G KTG AS E + ++ER RQL LE L DP ++ G Y C LC T H
Sbjct: 4 RGGSKTGNAHTAS--EIKKHKKERSRQLLLEAYGLMDDPSLSRDSTGKYVCLLCKTKHLT 61
Query: 327 EGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFVKIGRPGYRVTKQKDP 506
E SY+ H +GKKH+ P + V+ GR G+ +
Sbjct: 62 EMSYVKHREGKKHKEASSAKEENQRSI---------PSYSVRSLVEGGRRGHGIV----- 107
Query: 507 ETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPS 686
V+Y E+AE +P++RF+++ EQ +E D ++YL+F PYE I FK +
Sbjct: 108 ----------VNY-ELAE-EMPQYRFVNSLEQNVEEYDESFRYLVFVCRPYENIGFKFEN 155
Query: 687 REVEK 701
+E+++
Sbjct: 156 KEIDE 160
>UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_29_31467_32135 - Giardia lamblia
ATCC 50803
Length = 222
Score = 80.2 bits (189), Expect = 5e-14
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Frame = +3
Query: 174 GVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQ 353
GV + ++ + RR++ + ++ ++ DP+ KN+LG YECKLC T H ++ SY H
Sbjct: 16 GVETGQKARQHRRKQRETIVVDPA-VDVDPFCFKNYLGKYECKLCGTRHVDKESYAKHVS 74
Query: 354 GKKHQXXXXXXXXXXXXXXXXXXXPEK--PRIEPKKFV----------KIGRPGYRVTKQ 497
GK+HQ P+ P +P K P + V +
Sbjct: 75 GKRHQHFLSKKLKLSKKDDSDERDPKARLPMNQPGSSALSSTDRVMLRKRVLPKWHVDEV 134
Query: 498 KDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFK 677
PE+G+ + P++ G IPR+R +S Y+Q IEP QY++ + PY ++
Sbjct: 135 IHPESGKSGYCVSLWCPKMKVG-IPRYRIVSTYDQSIEPVSPDKQYIVISCHPYRSVGVC 193
Query: 678 VPSREVE 698
+ ++ ++
Sbjct: 194 IMNQPID 200
>UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6;
Saccharomycetales|Rep: Pre-mRNA-splicing factor PRP11 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 266
Score = 67.7 bits (158), Expect = 3e-10
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 31/219 (14%)
Frame = +3
Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALE------TIDLNKD------PYFMK 275
M++ G K GGGG+AS S+ N RR+ + L + T KD PY K
Sbjct: 1 MNYLEGVGSKKGGGGIASESQFNLQRRKEVESLLSKGENVPYTFQDEKDDQVRSNPYIYK 60
Query: 276 NHLGSYECKLCLTLHNNEGSYLAHTQGKKH-------QXXXXXXXXXXXXXXXXXXXPEK 434
NH G CKLC T+H + S H GKKH ++
Sbjct: 61 NHSGKLVCKLCNTMHMSWSSVERHLGGKKHGLNVLRRGISIEKSSLGREGQTTHDFRQQQ 120
Query: 435 PRIEPKKFVKIGR--PGYRVTKQKDPETGQQSLLFQVDY-PEIAEG---------VIPRH 578
IE K+ +K P ++ K+P+ G L QV+Y E+ E V P
Sbjct: 121 KIIEAKQSLKNNGTIPVCKIATVKNPKNGSVGLAIQVNYSSEVKENSVDSDDKAKVPPLI 180
Query: 579 RFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREV 695
R +S E + + ++L+ A EP+E IA ++P E+
Sbjct: 181 RIVSGLELS-DTKQKGKKFLVIAYEPFENIAIELPPNEI 218
>UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 246
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 456 FVKIGRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIE-PPDRRWQ 632
F GRP + + DPE Q + + +P+ A GV P HR+ SA EQ +E PPD
Sbjct: 114 FAPFGRPQFNYCTENDPELFQTKVWIEFFFPQAAAGVRPLHRWRSAREQDMERPPDDSVV 173
Query: 633 YLLFAAEPYETIAFKVPSR 689
YLL A E Y TIA K PS+
Sbjct: 174 YLLVACEGYVTIAVKFPSK 192
Score = 41.9 bits (94), Expect = 0.015
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 240 TIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 365
++ +DPY+ +NH+G C LC ++ ++L H GK H
Sbjct: 10 SLQARRDPYYKRNHMGRVTCTLCDVCCTDDNNFLKHIAGKTH 51
>UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 239
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 462 KIGRPGYRVTKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIE-PPDRRWQYL 638
+ G P Y + D + + +V + + EG P HR++SA EQ +E PPD + YL
Sbjct: 123 RFGTPLYSFRTEHDEVAYRTKVWIEVMFTQAEEGTRPLHRWLSAREQHVEKPPDDYFVYL 182
Query: 639 LFAAEPYETIAFKVPSR 689
LFA E Y T+A K P++
Sbjct: 183 LFACEGYTTVALKFPAK 199
Score = 39.5 bits (88), Expect = 0.082
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 258 DPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 365
+PYF +NH+G C LC E ++L H GK H
Sbjct: 21 NPYFKRNHMGQVTCTLCGIYCPEENNFLKHIAGKTH 56
>UniRef50_Q6E6H6 Cluster: Spliceosome-associated protein 62; n=1;
Antonospora locustae|Rep: Spliceosome-associated protein
62 - Antonospora locustae (Nosema locustae)
Length = 178
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 201 RDRRERLRQLALETID-LNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 365
+D + R L+ + L+ DP+F+ N+ G YEC LC TLH S++ H GK+H
Sbjct: 23 KDEKVRRSTALLKRLHGLDADPHFVTNNSGRYECSLCRTLHTTVQSFILHKSGKRH 78
>UniRef50_UPI000065ED29 Cluster: zinc finger, matrin type 4; n=3;
Euteleostomi|Rep: zinc finger, matrin type 4 - Takifugu
rubripes
Length = 230
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 192 ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
+ N R + L QL +T+D+ + MK SY C++C N+ Y AH QG KHQ
Sbjct: 177 KKNAARADLLEQLG-KTLDMGE----MKGLKRSYSCEVCSVTLNSVAQYHAHLQGSKHQ 230
>UniRef50_Q4SKX5 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 282
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 192 ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
E + RR R LE + + D SY C +C + N+ Y AH QG KHQ
Sbjct: 224 EGKKHRRNAARARLLEQLAGSLDATESTGLRSSYSCSICNVVLNSIEQYHAHLQGSKHQ 282
>UniRef50_UPI00015554D6 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 466
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 273 KNHL-GSYECKLCLTLHNNEGSYLAHTQGKKH 365
KNHL S +CK+C L +E LAH Q KKH
Sbjct: 267 KNHLFTSTQCKVCSALLISESQKLAHYQSKKH 298
>UniRef50_Q2NBA3 Cluster: Carboxynorspermidine decarboxylase; n=4;
Sphingomonadales|Rep: Carboxynorspermidine decarboxylase
- Erythrobacter litoralis (strain HTCC2594)
Length = 415
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 501 DPETGQQSLLFQVDY--PEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPY 659
DP + L F +D PEI EG+ H F + EQ EP R W + A EP+
Sbjct: 157 DPSSPGSRLGFPIDQLTPEIMEGIEGIH-FHNLCEQDFEPLHRTWDKVFDAIEPW 210
>UniRef50_UPI0000F2B9BF Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 377
Score = 33.1 bits (72), Expect = 7.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 192 ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
+ N R + L QL +T+DL + ++ SY C +C N+ Y AH +G KHQ
Sbjct: 289 KKNAARVDLLEQLG-KTLDLGE----LRGLRRSYTCSICHVTLNSIEQYHAHLKGSKHQ 342
>UniRef50_Q4U9S8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 261
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 273 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 365
K+ G + CK C L + SYL H GKKH
Sbjct: 90 KSKQGGFFCKTCNCLLKDSQSYLDHLNGKKH 120
>UniRef50_A7RJ77 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 925
Score = 32.7 bits (71), Expect = 9.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 228 LALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 365
LA + +D+ F K Y CK+C + N E ++ H GKKH
Sbjct: 398 LANQNVDMLVKTLFDKGRQ-KYVCKVCKIMCNKEHAFRMHLHGKKH 442
>UniRef50_P17041 Cluster: Zinc finger protein 32; n=18;
Eutheria|Rep: Zinc finger protein 32 - Homo sapiens
(Human)
Length = 273
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 174 GVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNEGSYLAH 347
G +SW N RRE+L Q + ++ L +D ++ + YEC+ C +GS H
Sbjct: 40 GSSSWDIQNSFRREKLEQKSPDSKTLQEDSPGVRQRV--YECQECGKSFRQKGSLTLH 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,529,631
Number of Sequences: 1657284
Number of extensions: 11668248
Number of successful extensions: 30110
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30079
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -