Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j19
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   1.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   5.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.8  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 291 YECKLCLTLHNNEGSYLAH 347
           YECKLCL   +  G+   H
Sbjct: 106 YECKLCLLRFSQSGNLNRH 124


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 291 YECKLCLTLHNNEGSYLAH 347
           YECKLCL   +  G+   H
Sbjct: 362 YECKLCLLRFSQSGNLNRH 380


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 580 LCLGITPSAISG*STWKSKLCCPVSGSF 497
           + LGI   A+     W+++  CP+ G F
Sbjct: 569 ISLGINSDALEPEWCWQNEENCPIGGKF 596


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 426 PEKPRIEPKKFVKIGRPGYRVTKQKD 503
           P  PRI      K G PG+    + D
Sbjct: 67  PSSPRISSPSSTKSGSPGFLTYTKAD 92


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 231 QAVVISPAGLCYFPTMTLHLLHQFY 157
           Q V I+  GL   PT+ L  LH+FY
Sbjct: 152 QYVRIAAKGL---PTLKLFALHEFY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,158
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)