Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j19
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.5  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   9.6  
AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    23   9.6  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 144 NRPGGKTGGGGVASWSESNRDRRERLRQ 227
           +RPG    GG V+  S++  DRR +  Q
Sbjct: 344 SRPGSSQLGGPVSPASDAGYDRRVKQEQ 371


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 153 GGKTGGGGVASWSESNRDRRERLRQ 227
           GG+ GGGG +   E +   +ER R+
Sbjct: 916 GGEVGGGGGSGGEEGSGAPKERKRK 940


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
 Frame = +3

Query: 432 KPRIEPKKFV-KIGRPGYRVTKQKDPETGQQ--SLLFQVDY--PEIAEGVIPRHRFMSAY 596
           +PRI+  + V K+  PG +   +     G     LL +VD   PE+ + V+ RH F  + 
Sbjct: 378 QPRIKLSQDVGKVTMPGSKNVFRLYGADGHALIDLLQRVDENPPEVGQKVLCRHPFQESK 437

Query: 597 EQKIEPPDRRWQYLLFAAEPYETIAFKVPSRE 692
              + P      Y ++ AE    +A  +PS E
Sbjct: 438 RAYVIPTQVEPLYRVYWAE--GRVAQVLPSLE 467


>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 476 WLQSNKTERS*NWTAELALPSRLSRDCRGCYT*T 577
           W++  KT R     AE    + L R  R  YT T
Sbjct: 1   WMKEKKTARKATAQAEFVAENGLPRRLRTAYTNT 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,832
Number of Sequences: 2352
Number of extensions: 13347
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)