Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j19
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118970-1|AAM50830.1|  264|Drosophila melanogaster LD47455p pro...   347   9e-96
AE014296-2197|AAF49876.1|  264|Drosophila melanogaster CG10754-P...   347   9e-96
U73125-1|AAB40721.1|  558|Drosophila melanogaster zinc-finger pr...    31   1.6  
AY058357-1|AAL13586.1|  635|Drosophila melanogaster GH12756p pro...    31   1.6  
AE014296-2637|AAF49537.2|  635|Drosophila melanogaster CG5215-PA...    31   1.6  
AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB...    31   1.6  
BT024237-1|ABC86299.1|  751|Drosophila melanogaster LD02865p pro...    30   3.7  
AY051809-1|AAK93233.1|  350|Drosophila melanogaster LD32068p pro...    30   3.7  
AE014296-240|AAF47485.1|  724|Drosophila melanogaster CG2199-PA,...    30   3.7  
AE014296-239|AAN11474.1|  733|Drosophila melanogaster CG2199-PB,...    30   3.7  
BT001375-1|AAN71130.1|  340|Drosophila melanogaster GH01139p pro...    29   6.4  
AY061480-1|AAL29028.1|  194|Drosophila melanogaster LD44732p pro...    29   6.4  
AE014296-810|AAF47873.1|  194|Drosophila melanogaster CG11586-PA...    29   6.4  
AE014296-94|AAF47381.1|  345|Drosophila melanogaster CG1231-PA p...    29   6.4  
AE014134-1683|AAN10707.1|  888|Drosophila melanogaster CG18660-P...    29   8.5  

>AY118970-1|AAM50830.1|  264|Drosophila melanogaster LD47455p
           protein.
          Length = 264

 Score =  347 bits (853), Expect = 9e-96
 Identities = 159/198 (80%), Positives = 168/198 (84%), Gaps = 1/198 (0%)
 Frame = +3

Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
           MDFQNR GGKTG GGVASWSE+NRDR+ERLRQLALETIDLNKDPYFMKNHLGSYECKLCL
Sbjct: 1   MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 60

Query: 312 TLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXX-PEKPRIEPKKFVKIGRPGYRV 488
           TLHNNEGSYLAHTQGKKHQ                    PEKPR+EPKKFVKIGRPGYRV
Sbjct: 61  TLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPRVEPKKFVKIGRPGYRV 120

Query: 489 TKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETI 668
           TKQ++   GQQSLLFQVDYPEI E ++PRHRFMSAYEQKIEPPDR+WQYLLFAAEPYETI
Sbjct: 121 TKQRELSNGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETI 180

Query: 669 AFKVPSREVEKHDSKFWT 722
            FKVPSREVEK + KFWT
Sbjct: 181 GFKVPSREVEKSEGKFWT 198


>AE014296-2197|AAF49876.1|  264|Drosophila melanogaster CG10754-PA
           protein.
          Length = 264

 Score =  347 bits (853), Expect = 9e-96
 Identities = 159/198 (80%), Positives = 168/198 (84%), Gaps = 1/198 (0%)
 Frame = +3

Query: 132 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 311
           MDFQNR GGKTG GGVASWSE+NRDR+ERLRQLALETIDLNKDPYFMKNHLGSYECKLCL
Sbjct: 1   MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNHLGSYECKLCL 60

Query: 312 TLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXX-PEKPRIEPKKFVKIGRPGYRV 488
           TLHNNEGSYLAHTQGKKHQ                    PEKPR+EPKKFVKIGRPGYRV
Sbjct: 61  TLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPRVEPKKFVKIGRPGYRV 120

Query: 489 TKQKDPETGQQSLLFQVDYPEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETI 668
           TKQ++   GQQSLLFQVDYPEI E ++PRHRFMSAYEQKIEPPDR+WQYLLFAAEPYETI
Sbjct: 121 TKQRELSNGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETI 180

Query: 669 AFKVPSREVEKHDSKFWT 722
            FKVPSREVEK + KFWT
Sbjct: 181 GFKVPSREVEKSEGKFWT 198


>U73125-1|AAB40721.1|  558|Drosophila melanogaster zinc-finger
           protein Zn72D protein.
          Length = 558

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 273 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 170 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 201


>AY058357-1|AAL13586.1|  635|Drosophila melanogaster GH12756p
           protein.
          Length = 635

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 273 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>AE014296-2637|AAF49537.2|  635|Drosophila melanogaster CG5215-PA,
           isoform A protein.
          Length = 635

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 273 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB,
           isoform B protein.
          Length = 884

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 273 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           +N   +Y C+LC        +Y AH +G KHQ
Sbjct: 247 QNRGNNYHCELCDVTCTGTDAYAAHVRGAKHQ 278


>BT024237-1|ABC86299.1|  751|Drosophila melanogaster LD02865p
           protein.
          Length = 751

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 258 DPYFMKNHLGSYECKLCLTLHNNEGSYLAH 347
           D +  K H    +C LC  ++ N+  Y+AH
Sbjct: 687 DSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 716


>AY051809-1|AAK93233.1|  350|Drosophila melanogaster LD32068p
           protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 258 DPYFMKNHLGSYECKLCLTLHNNEGSYLAH 347
           D +  K H    +C LC  ++ N+  Y+AH
Sbjct: 286 DSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 315


>AE014296-240|AAF47485.1|  724|Drosophila melanogaster CG2199-PA,
           isoform A protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 258 DPYFMKNHLGSYECKLCLTLHNNEGSYLAH 347
           D +  K H    +C LC  ++ N+  Y+AH
Sbjct: 660 DSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 689


>AE014296-239|AAN11474.1|  733|Drosophila melanogaster CG2199-PB,
           isoform B protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 258 DPYFMKNHLGSYECKLCLTLHNNEGSYLAH 347
           D +  K H    +C LC  ++ N+  Y+AH
Sbjct: 669 DSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 698


>BT001375-1|AAN71130.1|  340|Drosophila melanogaster GH01139p
           protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 183 SWSESNRDRRERLRQLALETIDLNKDPYFM-KNHLGSYECKLCLTLHNNEGSYLAHTQGK 359
           +W  S +D+      +  ET  L+     + +  +G Y C+ C  + N+E +   H  GK
Sbjct: 266 NWRTSRQDQNHSEAPIP-ETEKLDAAELALYRTPMGQYYCQPCNMMMNHESTLQQHFIGK 324

Query: 360 KH 365
           KH
Sbjct: 325 KH 326


>AY061480-1|AAL29028.1|  194|Drosophila melanogaster LD44732p
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 285 GSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           G Y C +C  +  +  ++L H  GKKHQ
Sbjct: 71  GGYYCNVCDCVVKDSINFLDHINGKKHQ 98


>AE014296-810|AAF47873.1|  194|Drosophila melanogaster CG11586-PA
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 285 GSYECKLCLTLHNNEGSYLAHTQGKKHQ 368
           G Y C +C  +  +  ++L H  GKKHQ
Sbjct: 71  GGYYCNVCDCVVKDSINFLDHINGKKHQ 98


>AE014296-94|AAF47381.1|  345|Drosophila melanogaster CG1231-PA
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 183 SWSESNRDRRERLRQLALETIDLNKDPYFM-KNHLGSYECKLCLTLHNNEGSYLAHTQGK 359
           +W  S +D+      +  ET  L+     + +  +G Y C+ C  + N+E +   H  GK
Sbjct: 271 NWRTSRQDQNHSEAPIP-ETEKLDAAELALYRTPMGQYYCQPCNMMMNHESTLQQHFIGK 329

Query: 360 KH 365
           KH
Sbjct: 330 KH 331


>AE014134-1683|AAN10707.1|  888|Drosophila melanogaster CG18660-PC,
           isoform C protein.
          Length = 888

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 153 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMK 275
           G  +GGGG +  +++    R  L QL + TID   D  F++
Sbjct: 550 GNSSGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLHDGKFVE 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,121,383
Number of Sequences: 53049
Number of extensions: 546591
Number of successful extensions: 1569
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)