Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j15
         (290 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   0.88 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   2.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   2.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   4.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   4.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   6.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    19   8.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    19   8.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 0.88
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 221 GGNLPSVCFVSKYFQQRLGHFQGAEHSHVF 132
           G N P    V+ +   R  HF GA++S VF
Sbjct: 239 GDNKPDTILVNGF--GRFKHFVGADNSTVF 266


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 262  WNLLCIKANVLNTTAAICRVSALFLNISNSGWVISRVLSIAMYLLSANLIFRVS*LSKLL 83
            W + C K    + +A    V  L       GW++S  +S +  ++ A   + V  LSK L
Sbjct: 1950 WQVDCNKGPASDKSAFADFVKELHEAFKPKGWLLSAAVSPSRRVVDAG--YDVPTLSKYL 2007


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 250 CIKANVLNTTAAICRVSALFLNISNSGW-VISRVLSIAMYLL 128
           CI++N+++         A FL +SN+ +   S V + + Y L
Sbjct: 79  CIESNMISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYSL 120


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 263 MESIVYKS*CAKHHGGNLPSVCFVSKY 183
           ++ + Y   C K      PSV F+S+Y
Sbjct: 41  LQELKYTKRCIKETLRLFPSVPFISRY 67


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -2

Query: 145 IAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSLFTISV 11
           I +   +++L+F +  L   LR  K+N      +W F  L   +V
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFLIVRTV 334


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -2

Query: 145 IAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSLFTISV 11
           I +   +++L+F +  L   LR  K+N      +W F  L   +V
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFLIVRTV 334


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 228 TPRRQFAECLLC 193
           TPR+Q   CL+C
Sbjct: 180 TPRQQEELCLVC 191


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 145 IAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSL 26
           I +   +++L+F +  L   LR  K+N      +W F  L
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = -2

Query: 166 VISRVLSIAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSLFT 20
           V   +  I +   +++L+F +  L   LR  +++      +W F+ L T
Sbjct: 281 VDKEIAYIVLLTFASDLLFILIQLFNSLRRMRNDLERLYFYWSFALLIT 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,142
Number of Sequences: 336
Number of extensions: 1152
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5109936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)