Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j15
         (290 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   0.43 
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    25   0.43 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   1.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   3.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   5.4  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    21   9.4  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 104 NSEN*IGAQQIHGYAQHPGNDPAAVGNI*KQSRHSANCRR 223
           NS N   + Q H   QH  + P+AV N    +RH++  RR
Sbjct: 820 NSTNSAYSMQSHQQQQH--HQPSAVSNSNGLARHNSKSRR 857


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 213 IAAVVFSTLAFIHNRFH 263
           + A+V S LA+IH R+H
Sbjct: 9   VLAIVLSCLAWIHRRYH 25


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 90   NCLDFLNQIRPIRRFFGSFHRCLQFR 13
            NC++F  + +PIRR+    HR +Q++
Sbjct: 1144 NCIEFALKAKPIRRYIPK-HR-IQYK 1167


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 220 AAICRVSALFLNISNSGWVISRVLSIAMYLLS 125
           A + R+  LF ++ N+G  +   L +AM L S
Sbjct: 116 AHLFRMDELFSSLMNAGQELDSSLKVAMVLKS 147


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 112  KLNWRSANTWL 144
            K +WRS++TW+
Sbjct: 2765 KWDWRSSSTWI 2775


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 12  TEIVNSDEKIQKTYELAEFDL 74
           T  VNS   + KTYE    DL
Sbjct: 140 TAFVNSAYSLLKTYEFDGLDL 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,056
Number of Sequences: 2352
Number of extensions: 5001
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)