Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2j15
(290 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103897-1|AAI03898.1| 225|Homo sapiens CHST13 protein protein. 29 2.7
BC103896-1|AAI03897.1| 225|Homo sapiens CHST13 protein protein. 29 2.7
EF492593-1|ABP48171.1| 85|Homo sapiens immunoglobulin lambda l... 29 3.6
D86998-2|BAA20891.1| 97|Homo sapiens V2-8 protein. 29 3.6
DQ172635-1|ABA61888.1| 111|Homo sapiens immunoglobulin lambda l... 29 3.6
DQ098743-1|AAZ13674.1| 109|Homo sapiens immunoglobulin lambda l... 29 3.6
AY424544-1|AAR03009.1| 85|Homo sapiens immunoglobulin lambda l... 29 3.6
AJ578339-1|CAE18340.1| 106|Homo sapiens immunoglobulin lambda-1... 29 3.6
AJ578271-1|CAE18272.1| 95|Homo sapiens immunoglobulin lambda-1... 29 3.6
AJ414875-1|CAC94109.1| 81|Homo sapiens immunoglobulin lambda c... 29 3.6
AF121407-1|AAD29356.1| 95|Homo sapiens immunoglobulin lambda l... 29 3.6
U86805-1|AAB48618.1| 135|Homo sapiens Ig lambda chain V-region ... 28 6.3
DQ098731-1|AAZ13662.1| 109|Homo sapiens immunoglobulin lambda l... 28 6.3
DQ098721-1|AAZ13652.1| 109|Homo sapiens immunoglobulin lambda l... 28 6.3
AY574941-1|AAT86032.2| 152|Homo sapiens immunoglobulin mu light... 28 6.3
AY490877-1|AAR89604.1| 79|Homo sapiens immunoglobulin light ch... 28 6.3
BC013315-1|AAH13315.1| 352|Homo sapiens carbohydrate (chondroit... 27 8.3
AJ308454-1|CAC28922.1| 125|Homo sapiens immunoglobulin light ch... 27 8.3
AJ289134-1|CAB92134.1| 347|Homo sapiens chondroitin 4-O-sulfotr... 27 8.3
AJ269537-1|CAB87380.1| 352|Homo sapiens chondroitin-4-sulfotran... 27 8.3
AF239820-1|AAF81691.1| 352|Homo sapiens chondroitin 4-O-sulfotr... 27 8.3
AB042326-1|BAA95485.1| 352|Homo sapiens chondroitin 4-sulfotran... 27 8.3
>BC103897-1|AAI03898.1| 225|Homo sapiens CHST13 protein protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 LSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK-ADTRQIAAVVFSTLAFIHNR 257
L SL + +I L Y+A L E + L +RNK A TR V +T ++ +R
Sbjct: 149 LPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYRNKLARTRSATRVASATTSWASSR 208
>BC103896-1|AAI03897.1| 225|Homo sapiens CHST13 protein protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 LSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK-ADTRQIAAVVFSTLAFIHNR 257
L SL + +I L Y+A L E + L +RNK A TR V +T ++ +R
Sbjct: 149 LPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYRNKLARTRSATRVASATTSWASSR 208
>EF492593-1|ABP48171.1| 85|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 85
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 11 NNIGSKAVHWYQQKPGQDPVLV 32
>D86998-2|BAA20891.1| 97|Homo sapiens V2-8 protein.
Length = 97
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 25 NNIGSKAVHWYQQKPGQDPVLV 46
>DQ172635-1|ABA61888.1| 111|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 111
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 12 NNIGSKAVHWYQQKPGQDPVLV 33
>DQ098743-1|AAZ13674.1| 109|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 25 NNIGSKAVHWYQQKPGQDPVLV 46
>AY424544-1|AAR03009.1| 85|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 85
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 11 NNIGSKAVHWYQQKPGQDPVLV 32
>AJ578339-1|CAE18340.1| 106|Homo sapiens immunoglobulin lambda-1
variable region protein.
Length = 106
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 22 NNIGSKAVHWYQQKPGQDPVLV 43
>AJ578271-1|CAE18272.1| 95|Homo sapiens immunoglobulin lambda-1
variable region protein.
Length = 95
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 14 NNIGSKAVHWYQQKPGQDPVLV 35
>AJ414875-1|CAC94109.1| 81|Homo sapiens immunoglobulin lambda
chain variable region protein.
Length = 81
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 6 NNIGSKAVHWYQQKPGQDPVLV 27
>AF121407-1|AAD29356.1| 95|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 95
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG++ +H Y Q PG DP V
Sbjct: 24 NNIGSKAVHWYQQKPGQDPVLV 45
>U86805-1|AAB48618.1| 135|Homo sapiens Ig lambda chain V-region
protein.
Length = 135
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 EN*IGAQQIHGYAQHPGNDPAAV 178
EN IG++ +H Y Q PG P V
Sbjct: 24 ENNIGSKSVHWYQQKPGQAPVLV 46
>DQ098731-1|AAZ13662.1| 109|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 EN*IGAQQIHGYAQHPGNDPAAV 178
EN IG++ +H Y Q PG P V
Sbjct: 24 ENNIGSKSVHWYQQKPGQAPVLV 46
>DQ098721-1|AAZ13652.1| 109|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 EN*IGAQQIHGYAQHPGNDPAAV 178
EN IG++ +H Y Q PG P V
Sbjct: 24 ENNIGSKSVHWYQQKPGQAPVLV 46
>AY574941-1|AAT86032.2| 152|Homo sapiens immunoglobulin mu light
chain variable region protein.
Length = 152
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 EN*IGAQQIHGYAQHPGNDPAAV 178
EN IG++ +H Y Q PG P V
Sbjct: 24 ENNIGSKSVHWYQQKPGQAPVLV 46
>AY490877-1|AAR89604.1| 79|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 79
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 EN*IGAQQIHGYAQHPGNDPAAV 178
EN IG++ +H Y Q PG P V
Sbjct: 1 ENNIGSKSVHWYQQKPGQAPVLV 23
>BC013315-1|AAH13315.1| 352|Homo sapiens carbohydrate (chondroitin
4) sulfotransferase 11 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 78 NLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK 197
NL +L Y +I L YM L E + L+ +RNK
Sbjct: 160 NLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNK 199
>AJ308454-1|CAC28922.1| 125|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 125
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 113 N*IGAQQIHGYAQHPGNDPAAV 178
N IG+Q +H Y Q PG P V
Sbjct: 25 NNIGSQSVHWYQQKPGQAPVMV 46
>AJ289134-1|CAB92134.1| 347|Homo sapiens chondroitin
4-O-sulfotransferase protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 78 NLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK 197
NL +L Y +I L YM L E + L+ +RNK
Sbjct: 155 NLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNK 194
>AJ269537-1|CAB87380.1| 352|Homo sapiens
chondroitin-4-sulfotransferase protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 78 NLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK 197
NL +L Y +I L YM L E + L+ +RNK
Sbjct: 160 NLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNK 199
>AF239820-1|AAF81691.1| 352|Homo sapiens chondroitin
4-O-sulfotransferase 1 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 78 NLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK 197
NL +L Y +I L YM L E + L+ +RNK
Sbjct: 160 NLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNK 199
>AB042326-1|BAA95485.1| 352|Homo sapiens chondroitin
4-sulfotranseferase protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 78 NLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK 197
NL +L Y +I L YM L E + L+ +RNK
Sbjct: 160 NLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNK 199
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,879,752
Number of Sequences: 237096
Number of extensions: 708239
Number of successful extensions: 1756
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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