Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j15
         (290 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical pr...    27   1.7  
Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical p...    27   2.2  
U55365-9|AAA98574.1|  346|Caenorhabditis elegans Hypothetical pr...    26   5.2  
AF100305-2|AAC68917.1|  320|Caenorhabditis elegans Hypothetical ...    26   5.2  
Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...    25   6.8  
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...    25   6.8  
AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical...    25   6.8  
AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical ...    25   9.1  

>Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical
           protein H25K10.6 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 18  IVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLS 152
           I++S   ++   E+A  D +NLS L   ET+  K +    M ML+
Sbjct: 247 ILSSIRNVRGDVEIAATDFENLSFLTGLETITSKHSYLSKMTMLN 291


>Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical
           protein F01D5.9 protein.
          Length = 508

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -2

Query: 151 LSIAMYLLSANLIFRVS*LSKLLRFFK 71
           + IA+YLL+  +I+ V  LSK+L+F K
Sbjct: 1   MGIAVYLLALVVIYVVFNLSKILKFVK 27


>U55365-9|AAA98574.1|  346|Caenorhabditis elegans Hypothetical
           protein C12D5.9 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 289 LLVKLVTSGWNLLCIKANVLNTTAAICRVSALFL 188
           LLV LV S +N +  K+N+LN+   +C     F+
Sbjct: 6   LLVCLVMSYFNFVDSKSNLLNSPLRVCTPKEQFV 39


>AF100305-2|AAC68917.1|  320|Caenorhabditis elegans Hypothetical
           protein W04B5.5 protein.
          Length = 320

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +3

Query: 84  SSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAVVFSTLAFIH 251
           ++ +  E+L   L  +KY   L TL   QP  +   N AD+R  AA + S L  IH
Sbjct: 100 ATFQDSESLYFVLEYAKY-GDLCTLMQKQPDSKF--NVADSRYYAANLLSALEHIH 152


>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 21  VNSDEKIQKTYELAEFDLKNLSSLESYE 104
           V +DEK+ KT+E  E   K + SLES E
Sbjct: 172 VGTDEKVMKTWESVE---KVIGSLESNE 196


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 21  VNSDEKIQKTYELAEFDLKNLSSLESYE 104
           V +DEK+ KT+E  E   K + SLES E
Sbjct: 134 VGTDEKVMKTWESVE---KVIGSLESNE 158


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 21  VNSDEKIQKTYELAEFDLKNLSSLESYE 104
           V +DEK+ KT+E  E   K + SLES E
Sbjct: 172 VGTDEKVMKTWESVE---KVIGSLESNE 196


>AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical
           protein Y73F8A.34a protein.
          Length = 485

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 139 WLCSAPWK*PSRCWKYLE 192
           WLC   WK  ++C +Y+E
Sbjct: 308 WLCLGDWKNHAQCNRYVE 325


>AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical
           protein F37C4.6 protein.
          Length = 544

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 287 VSKISNKWMESIVYKS 240
           +SKI NKW ES V K+
Sbjct: 195 ISKIMNKWFESDVLKA 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,577,140
Number of Sequences: 27780
Number of extensions: 116599
Number of successful extensions: 312
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)