Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j10
         (287 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...   112   2e-27
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   2.3  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   2.3  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   3.0  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           22   4.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            22   5.2  
AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical prote...    21   6.9  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score =  112 bits (270), Expect = 2e-27
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +2

Query: 74  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 241
           MG AN+WYSHPR+YGQGSR  R+CSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 106 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 201
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 106 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 201
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 106 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 201
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 140  IGMTGILVRICEGENTKYLRGPF 72
            I   G+L   C G N+ Y+  P+
Sbjct: 3121 IEYNGLLTTACAGTNSSYMYTPY 3143


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 140  IGMTGILVRICEGENTKYLRGPF 72
            I   G+L   C G N+ Y+  P+
Sbjct: 3124 IEYNGLLTTACAGTNSSYMYTPY 3146


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 106 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 201
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKSNREKMTQIM 124


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 79  AHFKKLNCFSLTSNKL 32
           +H+K++ C+SL    L
Sbjct: 174 SHYKRIQCYSLKQRSL 189


>AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical
          protein 13 protein.
          Length = 56

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +1

Query: 10 FAILKVYLICC--SLARNNLI 66
          FA+L V L+CC  S+  N +I
Sbjct: 6  FALLLVVLVCCLVSVQGNEII 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,251
Number of Sequences: 2352
Number of extensions: 7034
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)