Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2j05
(712 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021249-1|AAX33397.1| 998|Drosophila melanogaster RE60631p pro... 31 1.5
AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-P... 31 1.5
AE014297-2205|ABC66179.1| 998|Drosophila melanogaster CG12753-P... 31 1.5
AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p pro... 31 2.0
AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-P... 31 2.0
AE014296-338|AAF47554.1| 760|Drosophila melanogaster CG18171-PA... 30 3.6
AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p pro... 29 4.7
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 29 8.2
BT021939-1|AAX51644.1| 715|Drosophila melanogaster RE27718p pro... 29 8.2
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 29 8.2
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 29 8.2
>BT021249-1|AAX33397.1| 998|Drosophila melanogaster RE60631p
protein.
Length = 998
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = -1
Query: 559 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 380
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 379 KLFNNTINDFKLYTELYEFIERTEGV 302
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-PA,
isoform A protein.
Length = 1067
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = -1
Query: 559 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 380
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 379 KLFNNTINDFKLYTELYEFIERTEGV 302
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AE014297-2205|ABC66179.1| 998|Drosophila melanogaster CG12753-PB,
isoform B protein.
Length = 998
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = -1
Query: 559 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 380
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 379 KLFNNTINDFKLYTELYEFIERTEGV 302
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p
protein.
Length = 235
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 688 NMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID---FLTENF 518
N ++ND V++A + P R +QKW F + RI L++ +L+ N
Sbjct: 119 NDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVELSFYLSSNH 177
Query: 517 PNNVKNKT 494
+N+KN T
Sbjct: 178 ADNIKNCT 185
>AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-PA
protein.
Length = 235
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 688 NMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID---FLTENF 518
N ++ND V++A + P R +QKW F + RI L++ +L+ N
Sbjct: 119 NDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVELSFYLSSNH 177
Query: 517 PNNVKNKT 494
+N+KN T
Sbjct: 178 ADNIKNCT 185
>AE014296-338|AAF47554.1| 760|Drosophila melanogaster CG18171-PA
protein.
Length = 760
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 523 NFPNNVK-NKTFNFSSTGHLFHSLHAYVPSVSDLVK-ERKQIRLQTEYLAKLFNNTINDF 350
+F N V N F + G +H + S+ D+V+ R + LQ + +L N+ +N F
Sbjct: 375 HFVNLVSLNLEFLGPALGRKYHKRNVLF-SIKDMVRLARGLVALQQLQIFRLRNSRLNSF 433
Query: 349 KLYT 338
KLYT
Sbjct: 434 KLYT 437
>AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p
protein.
Length = 229
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 444 CPASAIW*RSANKFDCRQNIWQSCS 370
C ASA W RS+ K +++IW C+
Sbjct: 205 CAASATWPRSSQKSSSKRSIWIRCA 229
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 518 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 342
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 774 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 833
Query: 341 H*VVRVYRTDR 309
V R+ R R
Sbjct: 834 MEVRRIIRALR 844
>BT021939-1|AAX51644.1| 715|Drosophila melanogaster RE27718p
protein.
Length = 715
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 518 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 342
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 320 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 379
Query: 341 H*VVRVYRTDR 309
V R+ R R
Sbjct: 380 MEVRRIIRALR 390
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 28.7 bits (61), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = -1
Query: 622 HNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPN-NVKNKTFNFSSTGHLFHSLHAY 446
+ + T+ LF +++ SKL + L N N K N S+ ++F +
Sbjct: 930 NTIHSTTNIRPIDLFNNILCHEDISKLSEKLVRNKQTLNAKQDNINESNFSNIFVKNN-- 987
Query: 445 VPSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDC 296
V + K+I T+Y L NN N K+Y + + + + DC
Sbjct: 988 --QVGKSNPKYKEISNYTQYGNYLINNKDNKRKIYKDQVKRKYKYQNEDC 1035
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 518 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 342
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 855 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 914
Query: 341 H*VVRVYRTDR 309
V R+ R R
Sbjct: 915 MEVRRIIRALR 925
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,904,423
Number of Sequences: 53049
Number of extensions: 609502
Number of successful extensions: 1569
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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