Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2j04
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    29   0.021
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    27   0.086
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.086
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   2.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   7.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   7.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   7.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   7.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   9.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   9.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 0.021
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +3

Query: 210 ESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG-GKKRVFNTKTLKDQ 386
           E E+ +  D  + +K ++  ED +KD   +E   +DE+     E   KK+    K  +D+
Sbjct: 218 EREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDE 277

Query: 387 --NGQYPVW 407
             N   P+W
Sbjct: 278 ELNKTKPIW 286


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 27.1 bits (57), Expect = 0.086
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = -2

Query: 360 KLFSCR-LHYRPQRFHHLNSFRRLH---YPFRC 274
           K F C+  H R  R HHL +  RLH    P+RC
Sbjct: 8   KPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 40


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 0.086
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = -2

Query: 360 KLFSCR-LHYRPQRFHHLNSFRRLH---YPFRC 274
           K F C+  H R  R HHL +  RLH    P+RC
Sbjct: 161 KPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 193


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 99  RKCRAIKRERYAVKELARLKKMLGVKDEEKPAG 197
           RK   I  E     +L ++K ++ V+DE KP G
Sbjct: 150 RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 255 SKKVLEDIEKDNEDVEMSSDDENVVVDSE 341
           SKK  ED E ++   +   DDEN+ VD +
Sbjct: 21  SKK--EDEEVEHRLSDRDDDDENITVDDD 47


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 321 NVVVDSEGGKKRVFNT 368
           N+ V S+G  K  FNT
Sbjct: 434 NIEVQSQGSSKNTFNT 449


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 42  SKYFCF*NAMAKSIRSRWKR 101
           SKY  F N M      +W+R
Sbjct: 697 SKYLDFINVMTYDFHGQWER 716


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 208 ITSLPAGFSSSLTPSIFFNRA 146
           ITS PAG S +  P  F  R+
Sbjct: 27  ITSSPAGRSPAFLPHHFTKRS 47


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 208 ITSLPAGFSSSLTPSIFFNRA 146
           ITS PAG S +  P  F  R+
Sbjct: 27  ITSSPAGRSPAFLPHHFTKRS 47


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 208 ITSLPAGFSSSLTPSIFFNRA 146
           ITS PAG S +  P  F  R+
Sbjct: 27  ITSSPAGRSPAFLPHHFTKRS 47


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 246 LKKSKKVLEDIEKDNEDVE 302
           LK  KKVLED +   + ++
Sbjct: 141 LKPVKKVLEDADMTKDQID 159


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -2

Query: 78 ISPLRFKNKNILKQRHALLKVIA 10
          I+P+ +KN N+   +  +++ +A
Sbjct: 22 IAPISYKNSNVNYSKIGIVQTVA 44


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 423 SYVCATKPGTVRSD 382
           SY+C  KPG   S+
Sbjct: 44  SYICTCKPGFTGSN 57


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 11 AITFKSAWRC 40
          A+TF SAW C
Sbjct: 42 AVTFFSAWIC 51


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -3

Query: 227 YNLLRFHNLTSSWFLFIFDAEHFFQSR*FFY 135
           Y+LLR   +  SW+  + +  +   +R +++
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTNRKYYW 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,642
Number of Sequences: 336
Number of extensions: 1952
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)