BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2j03
(299 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IH26 Cluster: GM20929p; n=4; Diptera|Rep: GM20929p - ... 62 2e-09
UniRef50_UPI0000F2B687 Cluster: PREDICTED: similar to hCG23722; ... 58 4e-08
UniRef50_Q8UW71 Cluster: P11F3; n=5; Coelomata|Rep: P11F3 - Xeno... 57 9e-08
UniRef50_Q54V54 Cluster: Dolichyl-diphosphooligosaccharide-prote... 43 0.001
UniRef50_UPI00005A2E6B Cluster: PREDICTED: similar to C05G5.5; n... 42 0.003
UniRef50_Q9SF57 Cluster: Putative uncharacterized protein F11F8_... 37 0.10
UniRef50_Q0UMV7 Cluster: Predicted protein; n=1; Phaeosphaeria n... 36 0.24
UniRef50_Q96VG2 Cluster: Probable dolichyl-diphosphooligosacchar... 34 0.54
UniRef50_Q8RAV9 Cluster: Diguanylate cyclase/phosphodiesterase d... 33 1.3
UniRef50_Q88TR7 Cluster: ABC transporter, permease protein; n=1;... 33 1.3
UniRef50_A6RFD3 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 1.3
UniRef50_Q8IJZ5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_UPI000155383F Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_Q4V1G9 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_A5TVG1 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q8X043 Cluster: Putative uncharacterized protein B1K11.... 32 2.9
UniRef50_Q97FI5 Cluster: Uncharacterized membrane protein, YPAA ... 31 5.1
UniRef50_Q9P838 Cluster: Dolichyl-diphosphooligosaccharide--prot... 31 6.7
UniRef50_Q8GPE7 Cluster: Eps4N; n=1; Streptococcus thermophilus|... 30 8.9
UniRef50_Q2ESK9 Cluster: Hypothetical membrane protein; n=1; Bac... 30 8.9
UniRef50_A3PE71 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A1HUE2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A2FPM7 Cluster: Adenylate and Guanylate cyclase catalyt... 30 8.9
UniRef50_A2FID1 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A0CXA0 Cluster: Chromosome undetermined scaffold_30, wh... 30 8.9
>UniRef50_Q8IH26 Cluster: GM20929p; n=4; Diptera|Rep: GM20929p -
Drosophila melanogaster (Fruit fly)
Length = 56
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +1
Query: 94 KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
KMITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 16 KMITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 50
>UniRef50_UPI0000F2B687 Cluster: PREDICTED: similar to hCG23722;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG23722 - Monodelphis domestica
Length = 164
Score = 58.0 bits (134), Expect = 4e-08
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = +1
Query: 94 KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
+MITD+QLA+F+N+LGVS+FLLV+LYHY+ N+ K
Sbjct: 127 RMITDVQLAIFANMLGVSLFLLVVLYHYVAVNNPK 161
>UniRef50_Q8UW71 Cluster: P11F3; n=5; Coelomata|Rep: P11F3 - Xenopus
laevis (African clawed frog)
Length = 37
Score = 56.8 bits (131), Expect = 9e-08
Identities = 22/34 (64%), Positives = 32/34 (94%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
MI+D+QLA+F+N+LGVS+FLLV+LYHY++ N+ K
Sbjct: 1 MISDVQLAIFANMLGVSLFLLVVLYHYVSVNNPK 34
>UniRef50_Q54V54 Cluster: Dolichyl-diphosphooligosaccharide-protein
glycotransferase; n=1; Dictyostelium discoideum AX4|Rep:
Dolichyl-diphosphooligosaccharide-protein
glycotransferase - Dictyostelium discoideum AX4
Length = 40
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYI 180
MITD QL + SN LG +IFLL++ YHY+
Sbjct: 1 MITDTQLTLLSNTLGATIFLLIVYYHYV 28
>UniRef50_UPI00005A2E6B Cluster: PREDICTED: similar to C05G5.5; n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to
C05G5.5 - Canis familiaris
Length = 550
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
M TD+++A+ +N+LGVS+F LV+L HY+ N K
Sbjct: 1 MTTDVRVALLANMLGVSLFPLVVLCHYVAVNHPK 34
>UniRef50_Q9SF57 Cluster: Putative uncharacterized protein F11F8_3;
n=3; rosids|Rep: Putative uncharacterized protein
F11F8_3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 35
Score = 36.7 bits (81), Expect = 0.10
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINAN 189
M D L F+N LG+ IF+LVI YH++ A+
Sbjct: 1 MFDDQDLGFFANFLGIFIFILVIAYHFVMAD 31
>UniRef50_Q0UMV7 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 98
Score = 35.5 bits (78), Expect = 0.24
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
MITD QL + LG + LL++LYH++ NS +
Sbjct: 49 MITDSQLYSLAIFLGSAAMLLIVLYHFLEVNSEE 82
>UniRef50_Q96VG2 Cluster: Probable
dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 4 kDa subunit; n=1;
Schizosaccharomyces pombe|Rep: Probable
dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 4 kDa subunit - Schizosaccharomyces
pombe (Fission yeast)
Length = 32
Score = 34.3 bits (75), Expect = 0.54
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 100 ITDIQLAVFSNILGVSIFLLVILYHYIN 183
+TD+QL G+S+ LL+ILYHY++
Sbjct: 1 MTDVQLQNIVTTFGISMMLLIILYHYLS 28
>UniRef50_Q8RAV9 Cluster: Diguanylate cyclase/phosphodiesterase
domain 2; n=2; Clostridia|Rep: Diguanylate
cyclase/phosphodiesterase domain 2 - Thermoanaerobacter
tengcongensis
Length = 793
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 253 HFLLETPMLLQWPRLTYIIWNYSHLCSDTG 164
H+ E PM+L+ R YI+W+ S +C D G
Sbjct: 101 HYKCENPMVLKDGRQIYIMWHNSIICDDEG 130
>UniRef50_Q88TR7 Cluster: ABC transporter, permease protein; n=1;
Lactobacillus plantarum|Rep: ABC transporter, permease
protein - Lactobacillus plantarum
Length = 863
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 79 KTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANSSK*YRSIAAI 222
K +N KM+ + L V ++ LV+LY+ N N S+ R ++ I
Sbjct: 721 KATNFKMLDSMNLVVLIFVISAGALALVVLYNLTNINVSERIRELSTI 768
>UniRef50_A6RFD3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 71
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINANS 192
MI+D QL + LG LL++LYHY+ N+
Sbjct: 1 MISDEQLYQLAMFLGSCAMLLIVLYHYLEVNA 32
>UniRef50_Q8IJZ5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3013
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 64 NLIQFKTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSL 243
N+ + T +L I+ +++ + NI + FL + HYI+ N K SI I+ L+ L
Sbjct: 2777 NIFELYTLSLNNISFLKILI--NIGRLEPFLFLKTLHYISGNIHKKVSSINKILFLLIIL 2834
Query: 244 IKN-----VLYIKM*IKVLL 288
IKN + Y+ + I +LL
Sbjct: 2835 IKNYKCIFIWYMNIIIDILL 2854
>UniRef50_UPI000155383F Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 102
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = -3
Query: 207 PISF---GTIRIYVVIQDN**EYGDSQNVGENRELDVGDH 97
P+SF G + +VVI+D+ E +Q+VGE+ EL V DH
Sbjct: 11 PLSFLLLGVVYCHVVIEDHKQEKRHAQHVGEDGELHVRDH 50
>UniRef50_Q4V1G9 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus E33L|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ZK / E33L)
Length = 352
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 127 SNILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSLIKNVLYIK 267
S I+ +++ILY YIN S ++S +V ++ +I +LY K
Sbjct: 112 SGIITAVTMVVLILYQYINERYSVGFKSFGVLVVCIILIIGYILYKK 158
>UniRef50_A5TVG1 Cluster: Putative uncharacterized protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Putative uncharacterized protein -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 971
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 64 NLIQFKTSNLKMITD-----IQLAVFSNILGVSIFLLVILYHYINANSSK 198
NLI F T ++K +TD +++ +I +++ L VI+++Y+ N+ K
Sbjct: 148 NLIYFSTLSIKALTDKLIKKVEIIPHDSIYLITLLLFVIIFYYLKKNNFK 197
>UniRef50_Q8X043 Cluster: Putative uncharacterized protein
B1K11.160; n=2; Dikarya|Rep: Putative uncharacterized
protein B1K11.160 - Neurospora crassa
Length = 142
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 76 FKTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANS 192
F +N MI+D +L + +LG + +L++L+H++ N+
Sbjct: 80 FSYANDTMISDAELYRLAIVLGCAAMVLIVLHHFLETNA 118
>UniRef50_Q97FI5 Cluster: Uncharacterized membrane protein, YPAA
B.subtilis ortholog; n=2; Clostridium|Rep:
Uncharacterized membrane protein, YPAA B.subtilis
ortholog - Clostridium acetobutylicum
Length = 193
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +1
Query: 61 FNLIQFKTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVS 240
+ +I+ K+ ++T I F+N LGV L +I YI+A + + S + VK+L+
Sbjct: 109 YKIIKKKSEKAGVVTGIIAGSFTNTLGV---LAMIYLLYIDAYAKALHISYSTAVKSLLL 165
Query: 241 LIKN 252
L+ N
Sbjct: 166 LVAN 169
>UniRef50_Q9P838 Cluster: Dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 4 kDa subunit; n=1; Candida
albicans|Rep: Dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 4 kDa subunit - Candida albicans
(Yeast)
Length = 60
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 97 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
MITD QL + G + +L+I+YH I+ N K
Sbjct: 1 MITDEQLNTIALTFGFASIILIIIYHAISTNVHK 34
>UniRef50_Q8GPE7 Cluster: Eps4N; n=1; Streptococcus
thermophilus|Rep: Eps4N - Streptococcus thermophilus
Length = 394
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 67 LIQFKTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANS 192
LI K N I +++A+ SNILGV I L++ L I AN+
Sbjct: 100 LISSKNVNFSKI--VKVALLSNILGVGITLIMALTGLIEANA 139
>UniRef50_Q2ESK9 Cluster: Hypothetical membrane protein; n=1;
Bacillus thuringiensis|Rep: Hypothetical membrane
protein - Bacillus thuringiensis
Length = 277
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 70 IQFKTSNLKMITDIQLAVFSNILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSLIK 249
I+ +NLK IT I+ + ++ + +FL ++Y +I ++ I+ ALV +
Sbjct: 57 IKLDKANLK-ITPIEFLLKKLVISIFVFLFALIYAWIFPQYKLIILTVGLIISALVFFYE 115
Query: 250 NV 255
NV
Sbjct: 116 NV 117
>UniRef50_A3PE71 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9301|Rep: Putative
uncharacterized protein - Prochlorococcus marinus
(strain MIT 9301)
Length = 586
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 79 KTSNLKMITDIQLAVFSN--ILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSLIKN 252
+T NL + T + + ++ + I L Y+YIN NSSK S+ + V++I
Sbjct: 100 RTLNLYLTTKLSATIGTDFSVKSYGILLNKPFYYYINENSSKTITSLTKYIDEYVAVIYA 159
Query: 253 VLYI 264
+L I
Sbjct: 160 ILEI 163
>UniRef50_A1HUE2 Cluster: Putative uncharacterized protein; n=1;
Thermosinus carboxydivorans Nor1|Rep: Putative
uncharacterized protein - Thermosinus carboxydivorans
Nor1
Length = 172
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 94 KMITDIQLAVFSNILGVSIFLLVILYH-YINANSSK*YRSIAAIVKALVSLIKNVLYIKM 270
K++ D +A + + G+ IF+ + Y+ Y YR +A I K ++LI ++L K+
Sbjct: 60 KLLLD-SIAAYHELEGIEIFMTDVTYYTYDQVTMLTIYRDVATITKGEIALIISLLRDKL 118
>UniRef50_A2FPM7 Cluster: Adenylate and Guanylate cyclase catalytic
domain containing protein; n=1; Trichomonas vaginalis
G3|Rep: Adenylate and Guanylate cyclase catalytic domain
containing protein - Trichomonas vaginalis G3
Length = 713
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 133 ILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSLIKNVL 258
I+GV+IFLL++ I + + AI K L+SL KNV+
Sbjct: 16 IIGVAIFLLLVFVAIIAISWKRLNNDKTAIYKTLMSLPKNVV 57
>UniRef50_A2FID1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1052
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 133 ILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVSLIKNVL 258
I+GV+IFLL++ I + + AI K L+SL KNV+
Sbjct: 848 IIGVAIFLLLVFVAIIAISWKRLNNDKTAIYKTLMSLPKNVV 889
>UniRef50_A0CXA0 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2278
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 153 LISYPVSLHKCE*FQMI*VNRGHCKSIGVSNKKCALY*DVNKSFTR 290
+ SY + CE +N C IG+S K C L + N +F R
Sbjct: 219 ICSYNIETQSCEEVTQSQLNNLSCSEIGLSKKACLLIKNTNCTFYR 264
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,965,630
Number of Sequences: 1657284
Number of extensions: 4895616
Number of successful extensions: 8460
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8460
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -