Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i20
(270 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 20 4.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 20 4.7
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 20 6.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 6.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 6.2
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 19 8.2
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 19 8.2
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 19 8.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 19 8.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 19 8.2
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 19 8.2
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.2 bits (40), Expect = 4.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 43 EGCKKFFK 20
EGCK FFK
Sbjct: 128 EGCKGFFK 135
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.2 bits (40), Expect = 4.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 43 EGCKKFFK 20
EGCK FFK
Sbjct: 128 EGCKGFFK 135
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 19.8 bits (39), Expect = 6.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 12 VQHLKNFLHP 41
+QHLKN + P
Sbjct: 2 IQHLKNIMKP 11
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 6.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 39 PSFVQYNYKKNI 74
PS+ Q NY +NI
Sbjct: 540 PSYNQLNYNENI 551
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.8 bits (39), Expect = 6.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 49 TNEGCKKFFK 20
T EGCK FF+
Sbjct: 203 TCEGCKGFFR 212
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 19.4 bits (38), Expect = 8.2
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -1
Query: 66 FYNCTEQTRDAKSFSNAARQYF 1
FY+C + + D S + YF
Sbjct: 95 FYDCLKNSADTISSYFVGKMYF 116
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 19.4 bits (38), Expect = 8.2
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 185 DNGVEQKRFE 214
+N +E+KRFE
Sbjct: 103 NNAIEEKRFE 112
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.4 bits (38), Expect = 8.2
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -1
Query: 66 FYNCTEQTRDAKSFSNAARQYF 1
FY+C + + D S + YF
Sbjct: 100 FYDCLKNSADTISSYFVGKMYF 121
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 8.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 3 SIAVQHLKNFLHPSFVQYNYKKNINASXSKSFVFNEQVLLQQI 131
S+ +H K L+ YN + A+ S+ + LQQI
Sbjct: 49 SLCGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQI 91
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 8.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 3 SIAVQHLKNFLHPSFVQYNYKKNINASXSKSFVFNEQVLLQQI 131
S+ +H K L+ YN + A+ S+ + LQQI
Sbjct: 49 SLCGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQI 91
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 54 YNYKKNINASXSKSFVFN 107
YNYK N SK +N
Sbjct: 309 YNYKNYNNNYNSKKLYYN 326
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 54 YNYKKNINASXSKSFVFN 107
YNYK N SK +N
Sbjct: 320 YNYKNYNNNYNSKKLYYN 337
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.4 bits (38), Expect = 8.2
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -1
Query: 66 FYNCTEQTRDAKSFSNAARQYF 1
FY+C + + D S + YF
Sbjct: 100 FYDCLKNSADTISSYFVGKMYF 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,828
Number of Sequences: 438
Number of extensions: 724
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5138079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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