Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2i19
         (400 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5PP37 Cluster: Histone-lysine N-methyltransferase ATXR...    33   1.6  
UniRef50_A4YMM9 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_Q0TW57 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   4.8  
UniRef50_Q08929 Cluster: Glycerol uptake protein 2; n=9; Sacchar...    31   8.3  

>UniRef50_Q5PP37 Cluster: Histone-lysine N-methyltransferase ATXR2;
           n=8; Magnoliophyta|Rep: Histone-lysine
           N-methyltransferase ATXR2 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 473

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -3

Query: 212 TLPPICIDSNRFGQAVNPHVTKFASPSPLKTFTPAYQEFVCS-SAPESDDSLKYALWIKA 36
           TLP   + S   G+   PH  KF  PSPL       + F CS S   +D    ++L    
Sbjct: 146 TLPEGVVSSLMNGEMALPHTDKFPLPSPLSCPGGCQEAFYCSESCAAADWESSHSLLCTG 205

Query: 35  YFLASLSRNGL 3
               S+SR  L
Sbjct: 206 ERSESISREAL 216


>UniRef50_A4YMM9 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain ORS278)
          Length = 576

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 268 VGLLKKRTLRVAARSHSVLSETLRESPHS 354
           VGL+ + +LR  ARS  ++ E LR +PH+
Sbjct: 334 VGLMHRPSLRAFARSRDLIEEALRRAPHA 362


>UniRef50_Q0TW57 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 461

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 152 LHGDSPPDQSGLSLYRLVVMYIKAACDWRVAAALP 256
           LHGD  PD +G+S  R V++ + AA D      LP
Sbjct: 359 LHGDIKPDNTGISSGRAVLLDVDAAKDLNRVGTLP 393


>UniRef50_Q08929 Cluster: Glycerol uptake protein 2; n=9;
           Saccharomycetales|Rep: Glycerol uptake protein 2 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 609

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 140 TRIWLHGDSPPDQSGLSLYRLVVMYIKAACDWRV 241
           T+ W + D+P  Q+ ++L+ L +MY+K    WR+
Sbjct: 394 TKAW-NNDTPLQQAMIALFNLNIMYLKLLIPWRL 426


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,135,393
Number of Sequences: 1657284
Number of extensions: 8762809
Number of successful extensions: 22519
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22511
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)