Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2i19
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   0.84 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.1  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   5.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   5.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.9  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    20   7.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   7.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    20   7.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 192 RLKPLWSGGES 160
           RL P+W GGES
Sbjct: 219 RLPPVWQGGES 229


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 358 RRNEEIPSKSQRAPNAT 308
           ++NE+ PS  QR+P+ T
Sbjct: 691 KQNEKSPSPQQRSPSVT 707


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 119 FTPAYQEFVCSSAPESDDSLKYALWIK 39
           FT  Y +    +   SD+  +  LWIK
Sbjct: 90  FTTDYFKGCIDTLQRSDEEAQIQLWIK 116


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 119 FTPAYQEFVCSSAPESDDSLKYALWIK 39
           FT  Y +    +   SD+  +  LWIK
Sbjct: 90  FTTDYFKGCIDTLQRSDEEAQIQLWIK 116


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 212 TLPPICIDSNRFGQ 171
           T PP  I SNRFG+
Sbjct: 132 TSPPSPILSNRFGE 145


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 128 VGKATRIWLHGDSPPDQ 178
           V +  RI  HGD PP +
Sbjct: 20  VPQRLRIRHHGDKPPQE 36


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 5/20 (25%), Positives = 10/20 (50%)
 Frame = -2

Query: 213 YITTNLYRLKPLWSGGESPC 154
           +     YR +  W+  ++PC
Sbjct: 674 FYENKFYRQEAQWTSSDNPC 693


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 83   APESDDSLKYALWIKA 36
            A   D +LKY  W+ A
Sbjct: 1269 AKNLDSNLKYEFWVTA 1284


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 56  YALWIKAYFLASLSRNGL 3
           + LW  A     LS+NG+
Sbjct: 117 FLLWTPAVIFVVLSKNGI 134


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 339 GISSFLLHHCSRYF 380
           GI  FL+H   +YF
Sbjct: 89  GIGQFLVHRNPKYF 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,105
Number of Sequences: 336
Number of extensions: 1988
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)