BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i19
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 29 3.0
BT001739-1|AAN71494.1| 580|Drosophila melanogaster RE72930p pro... 29 3.0
AY069821-1|AAL39966.1| 566|Drosophila melanogaster SD07045p pro... 29 3.0
AY052104-1|AAK93528.1| 712|Drosophila melanogaster SD05186p pro... 29 3.0
AF241237-1|AAF63331.1| 566|Drosophila melanogaster IGF-II mRNA-... 29 3.0
AE014298-1506|ABI30974.1| 588|Drosophila melanogaster CG1691-PI... 29 3.0
AE014298-1505|AAN09275.1| 566|Drosophila melanogaster CG1691-PC... 29 3.0
AE014298-1504|AAN09274.1| 566|Drosophila melanogaster CG1691-PB... 29 3.0
AE014298-1503|AAF47958.2| 566|Drosophila melanogaster CG1691-PA... 29 3.0
AE014298-1502|AAN09273.1| 573|Drosophila melanogaster CG1691-PH... 29 3.0
AE014298-1501|AAN09272.1| 573|Drosophila melanogaster CG1691-PG... 29 3.0
AE014298-1500|AAN09271.1| 573|Drosophila melanogaster CG1691-PF... 29 3.0
AE014298-1499|AAN09270.1| 573|Drosophila melanogaster CG1691-PE... 29 3.0
AE014298-1498|AAN09269.1| 573|Drosophila melanogaster CG1691-PD... 29 3.0
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 29 3.0
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p protein.
Length = 1000
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 194 IDSNRFGQAVNPHVTKFASPS--PLKT-FTPAYQEFVCSSAPESDDSLKYALWIKAYF 30
+ ++G V + +F P+ P + FTPA ++VC APE + Y + F
Sbjct: 879 VADRQWGLCVFDDLIEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQF 936
>BT001739-1|AAN71494.1| 580|Drosophila melanogaster RE72930p
protein.
Length = 580
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 504 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 539
>AY069821-1|AAL39966.1| 566|Drosophila melanogaster SD07045p
protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 490 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 525
>AY052104-1|AAK93528.1| 712|Drosophila melanogaster SD05186p
protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 194 IDSNRFGQAVNPHVTKFASPS--PLKT-FTPAYQEFVCSSAPESDDSLKYALWIKAYF 30
+ ++G V + +F P+ P + FTPA ++VC APE + Y + F
Sbjct: 486 VADRQWGLCVFDDLIEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQF 543
>AF241237-1|AAF63331.1| 566|Drosophila melanogaster IGF-II
mRNA-binding protein protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 490 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 525
>AE014298-1506|ABI30974.1| 588|Drosophila melanogaster CG1691-PI,
isoform I protein.
Length = 588
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 512 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 547
>AE014298-1505|AAN09275.1| 566|Drosophila melanogaster CG1691-PC,
isoform C protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 490 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 525
>AE014298-1504|AAN09274.1| 566|Drosophila melanogaster CG1691-PB,
isoform B protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 490 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 525
>AE014298-1503|AAF47958.2| 566|Drosophila melanogaster CG1691-PA,
isoform A protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 490 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 525
>AE014298-1502|AAN09273.1| 573|Drosophila melanogaster CG1691-PH,
isoform H protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 497 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 532
>AE014298-1501|AAN09272.1| 573|Drosophila melanogaster CG1691-PG,
isoform G protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 497 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 532
>AE014298-1500|AAN09271.1| 573|Drosophila melanogaster CG1691-PF,
isoform F protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 497 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 532
>AE014298-1499|AAN09270.1| 573|Drosophila melanogaster CG1691-PE,
isoform E protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 497 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 532
>AE014298-1498|AAN09269.1| 573|Drosophila melanogaster CG1691-PD,
isoform D protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 358 RRNEEIPSKSQRAPNATGRQRVRSASSAVLPPRHGQ 251
++ + PS+ Q P Q V SASS+ PP H Q
Sbjct: 497 QQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 532
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 194 IDSNRFGQAVNPHVTKFASPS--PLKT-FTPAYQEFVCSSAPESDDSLKYALWIKAYF 30
+ ++G V + +F P+ P + FTPA ++VC APE + Y + F
Sbjct: 879 VADRQWGLCVFDDLIEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQF 936
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,439,230
Number of Sequences: 53049
Number of extensions: 417920
Number of successful extensions: 968
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -