Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2i19
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   2.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   3.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   6.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   6.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   9.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   9.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   9.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   9.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.1  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 59  KYALWIKAYFLASLS 15
           KY++WI    LASLS
Sbjct: 111 KYSVWIGGSILASLS 125


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 347 GDSLKVSESTECDRAAT 297
           GDS KVS+  E  R +T
Sbjct: 709 GDSFKVSKHEEVSRTST 725


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 189 LKPLWSGGES 160
           L P+W GGES
Sbjct: 224 LPPVWVGGES 233


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/45 (24%), Positives = 17/45 (37%)
 Frame = -1

Query: 337 SKSQRAPNATGRQRVRSASSAVLPPRHGQCCGDSPIACSFDIHYH 203
           ++   +P+ TG     S SSA   P         P   +   H+H
Sbjct: 56  AQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHH 100


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 264 GGRTAEEADLTRCRP 308
           GG   E+ D+T C P
Sbjct: 8   GGTMTEDYDMTGCGP 22


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 264 GGRTAEEADLTRCRP 308
           GG   E+ D+T C P
Sbjct: 8   GGTMTEDYDMTGCGP 22


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 171 GGESPCNQIRVAFPTQDIYPGLS 103
           GG     QIR AF  + + PG S
Sbjct: 388 GGRFEPPQIRQAFAEETLQPGPS 410


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 234 GESPQHCPCLGGRTAEEADLTR 299
           GE P  C   G   A  A LTR
Sbjct: 88  GEDPYRCNICGKTFAVPARLTR 109


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 264 GGRTAEEADLTRCRP 308
           GG   E+ D+T C P
Sbjct: 8   GGTMTEDYDMTGCGP 22


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 304 RQRVRSASSAVLPPRHGQCCGDSPIACSF 218
           R R    S+ V+P      CG   I CS+
Sbjct: 523 RPRHEIRSTDVIPGTQEHVCGVKGIPCSW 551


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,803
Number of Sequences: 438
Number of extensions: 2735
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)