Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i13
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|ch... 55 1e-08
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 53 4e-08
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 51 2e-07
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 50 5e-07
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 48 2e-06
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 43 4e-05
SPAC1002.16c |||nicotinic acid plasma membrane transporter |Schi... 41 2e-04
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 40 4e-04
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 38 0.001
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 38 0.002
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 38 0.002
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 37 0.003
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 37 0.003
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 37 0.004
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 37 0.004
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 37 0.004
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 36 0.005
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 36 0.008
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 35 0.011
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 35 0.015
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 33 0.059
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 33 0.059
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 32 0.078
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 29 0.55
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 29 0.55
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 27 2.2
SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 27 2.2
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 2.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 27 2.9
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 27 2.9
SPAC1142.05 |ctr5||copper transporter complex subunit Ctr5 |Schi... 27 3.9
SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp... 26 5.1
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.8
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.8
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 25 9.0
SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyce... 25 9.0
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 9.0
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 9.0
>SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 522
Score = 55.2 bits (127), Expect = 1e-08
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Frame = +1
Query: 286 DSSLQGYILSS----FFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 453
D+ + G+ SS F+ GY++ Q P IL ++ F+ + + S L+ A
Sbjct: 106 DTHIDGHTYSSMTTLFYAGYLVAQYPAAILMQKCRLSYFIFCNVFLWSAMVCLM-AACRN 164
Query: 454 GYGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLS-G 630
G L+ +RF+ G+ E I P + A W E+ YA +I LS G
Sbjct: 165 GPS-LLGLRFLAGIFEASITPAFINITAMWYRREEQPMRTLCWYAFNGIAQIIGSILSYG 223
Query: 631 LLSAYGFAGGWPSIFYVFGMIGTVWCLAFLFFVS 732
L +G W +F V G++ W + F+F S
Sbjct: 224 LGHIHGKVASWRYVFIVIGLMSLGWGVVFVFIPS 257
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 53.2 bits (122), Expect = 4e-08
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Frame = +1
Query: 268 DGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAA 447
D D + ++S F+ +V+ PF L KRFGA L ML S + + AA
Sbjct: 88 DKDLGFVGDQYNIMISIFYIPFVLCAFPFSYLYKRFGAARILPFFML--SFGAMSLCQAA 145
Query: 448 EAGYGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLS 627
+G ++ VR+ G+ E ++P L + E +R A YA A +S
Sbjct: 146 VKNFGGMMAVRWFLGMAESAVLPGVVYYLTTFYRRTELARRLAIFYAAAN----VSSAFG 201
Query: 628 GLLSAYGF-------AGGWPSIFYVFGMIGTVWCLAFLFFV 729
GLL AYG GW +F + G + T C +F V
Sbjct: 202 GLL-AYGVFHIKGGKLQGWQYLFLIEGGV-TFLCAIVIFLV 240
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 51.2 bits (117), Expect = 2e-07
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 13/173 (7%)
Frame = +1
Query: 286 DSSLQGYILS---SFFYG-YVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 453
D LQ Y S S FY Y+ + P +L K+FG +L M+I + L+
Sbjct: 73 DLKLQAYQYSAAVSVFYATYITAETPSVLLVKKFGPHYYLSA-MIIG--WSLVTIFTCFV 129
Query: 454 GYGW-LIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYA----GAQFGTVISM 618
+ W L++ R + G+ EG PC ++ E+ + A +Y FG +I+
Sbjct: 130 RHYWSLVLTRLLLGICEGGFFPCLSLYISMTYKREEQGKRLAYLYVCSCFSGAFGGLIAT 189
Query: 619 PLSGLLSAYGFAGGWPSIFYVFGMIGTVWCLAFLFFVSEDPEQC----PRIKE 765
L+ + + G W ++ + G+I + L LF + +DP PR KE
Sbjct: 190 GLTKIPKSSGLPN-WGWLYIIEGLISAISALWILFCLPDDPSTARFLNPREKE 241
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 49.6 bits (113), Expect = 5e-07
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Frame = +1
Query: 319 FFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVA-AEAGYGWLIVVRFIQGL 495
F GY+I Q+P +R ARL+ V +N ++GL+ + A L+++RF +
Sbjct: 76 FTCGYIIGQLPGSYALQRVPARLWFSV---MNILWGLMTIFSFAVHSVRALMILRFFMAV 132
Query: 496 GEGPIVPCTHAMLAKWVPPNERSR----MGAAVYAGAQFGTVISMPLSGLLSAYGFAGGW 663
E TH +L W +E + A+ G F + + L+ G GW
Sbjct: 133 AEASTFAGTHYILGAWYKESELCKRAGIFSASGLVGTMFAGYLQTAVHSSLNGKGGLSGW 192
Query: 664 PSIFYVFGMIGTVWCLAFLFFVSEDPE 744
+F + G++ L LF + PE
Sbjct: 193 RWLFIIDGILTIPLSLYGLFLFPDVPE 219
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 47.6 bits (108), Expect = 2e-06
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 NKTSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSV 420
N +V+ D + + + ++F+ GY++ + P +L +RF L V ++I
Sbjct: 83 NSYAVIMGLKEDLKMEGQMYSWSGTAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVI--- 139
Query: 421 FGLLVPVAAEAGYGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQF 600
+G L+ + + A Y I +R + G+ E P + A+W +E+ + A
Sbjct: 140 WGFLLCMTSVANYPGFIALRVLLGMMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGL 199
Query: 601 GTVISMPLS-GLLSAYGF-AGGWPSIFYVFGMIGTVWCLAFLFFVSEDP 741
G ++ ++ GL GW IF + G++ L V ++P
Sbjct: 200 GQILGSCMAYGLAKRTSLPMRGWKLIFIICGVLAIFLGFVILAVVPDNP 248
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 43.2 bits (97), Expect = 4e-05
Identities = 30/120 (25%), Positives = 54/120 (45%)
Frame = +1
Query: 286 DSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGW 465
+S+ + ILS + + I+ + LS+ FG R+ L VG +I VF + +A
Sbjct: 80 NSTEKALILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQ-- 137
Query: 466 LIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAY 645
+ + RF+ G G + ++ P+ER + A + G I +SG ++ Y
Sbjct: 138 MYIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAVAVMSLAPLLGPTIGPVVSGFIAEY 197
>SPAC1002.16c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Frame = +1
Query: 307 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFI 486
I S F+ +++ ++P +L K+ + L ++ S+ + +G L+ R +
Sbjct: 99 IASVFYVTFILFEMPTTLLMKKVQPKRMLAFIVISYSLTTIFTGFCHN--FGGLLAARLV 156
Query: 487 QGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQ----FGTVISMPLSGLLSAYGFA 654
G E + PC L E + A ++A + FG + + + + GFA
Sbjct: 157 LGFCEAGLFPCLALYLTMIYSRVELAPRIAYLFASSALSGAFGGLFAYAVLHMDGVGGFA 216
Query: 655 GGWPSIFYVFGMIGTVWCLAFLFFVSED 738
G W +F + G+IG V +A F + D
Sbjct: 217 G-WRWLFIIEGLIGFVCGVAVYFIIPND 243
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 39.9 bits (89), Expect = 4e-04
Identities = 23/89 (25%), Positives = 44/89 (49%)
Frame = +1
Query: 319 FFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLG 498
F+ G+VI QIP +L +RF F+ + ++ ++ A + L+ +RF GL
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVAASTALWTI--IIFLHCAAYNFSGLMALRFFLGLV 190
Query: 499 EGPIVPCTHAMLAKWVPPNERSRMGAAVY 585
E ++P A + + P +E++ + Y
Sbjct: 191 ESSLLPTMEATIGMFFPHSEQALLQPFFY 219
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +1
Query: 268 DGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAA 447
+G + S ++G + ++ G + Q+ FG + FG + G M+I + +L+
Sbjct: 85 NGKGHYPSGIRGLVNAASNIGNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIATILLIAMP 144
Query: 448 EAGYG------WLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTV 609
++ + W+ R++ G+G G P + A+ ++ N R + + ++A FGT+
Sbjct: 145 KSIHSPLSKMMWVFCWRWLLGVGIGGDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTL 204
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +1
Query: 271 GDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAE 450
G + S ++G + ++ G ++ Q+ FG L FG + G M++ + +L+ +
Sbjct: 76 GHQDYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPD 135
Query: 451 ------AGYGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTV 609
A WL R + G+G G P + ++ ++ N R + A +++ +GT+
Sbjct: 136 RIPTPTAKMMWLFAFRVMLGIGIGGDYPMSASITSEQSLINRRGALLAWIFSNQGWGTL 194
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 37.9 bits (84), Expect = 0.002
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +1
Query: 346 IPF-GILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLGEGPIVPCT 522
+PF GI+S+ G ++ L +++ +FG + AA+ WL++ R +QG+G G I
Sbjct: 142 LPFCGIMSEVVGRKIVLYTSIVL-FLFGSAMCGAAQ-NMLWLVLCRAVQGIGGGGITSLV 199
Query: 523 HAMLAKWVPPNERSRMGAAVYAGAQFGTVISM-PLSGLLSAYGFAGGWPSIFYVFGMIGT 699
++A P R + G +G M PL G A W IF++ G
Sbjct: 200 TIVIADITPLQTRPYYTGCM--GVTWGLASVMGPLIG--GAISQKASWRWIFFINLPTGG 255
Query: 700 VWCLAFLFFVSEDPE 744
+ +FF++ P+
Sbjct: 256 LSLALLIFFLNLVPK 270
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 37.1 bits (82), Expect = 0.003
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Frame = +1
Query: 283 WDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLV---PVAAEA 453
+ S + G + ++ G V QI FG + FG + G M++ + +LV P +
Sbjct: 85 YPSGIHGLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPT 144
Query: 454 GYG---WLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPL 624
G W+ R++ GLG G P + + ++ + R + + V++ FGT+ +
Sbjct: 145 PLGKMMWIFAWRWLLGLGIGGDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTLAGAIV 204
Query: 625 SGLLSA 642
+ +L A
Sbjct: 205 TIILLA 210
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 37.1 bits (82), Expect = 0.003
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 1/141 (0%)
Frame = +1
Query: 319 FFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLG 498
F+ GY++ Q P + + F F+G+ SV L A YG LI +RF G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFVGLVTFSWSVIVFLHCCAYN--YGGLIALRFFLGFT 203
Query: 499 EGPIVPCTHAMLAKWVPPNERSRMGAAVYAGA-QFGTVISMPLSGLLSAYGFAGGWPSIF 675
E ++P A + + E++ + + G GL W
Sbjct: 204 ESCLLPAMEATMGMFFTHQEQAFLQPVFWISCLSCGIPAGFIAYGLEFVTKSIAPWKLFM 263
Query: 676 YVFGMIGTVWCLAFLFFVSED 738
+ G I T + FLFF D
Sbjct: 264 IITGGI-TFFLSIFLFFYYPD 283
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Frame = +1
Query: 283 WDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYG 462
+ S ++G + +S G + Q+ FG + FG + G M+I + +LV ++ +
Sbjct: 90 YPSGIRGLVNASANIGNIFGQLLFGFMGDFFGRKFVYGKEMVIVIIATVLVIAMPKSIHS 149
Query: 463 ------WLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTV 609
W+ R++ G+G G P + A+ ++ R + + ++A FGT+
Sbjct: 150 PLSKMMWVFCWRWLLGVGIGGDYPMSAAITSERSKIKRRGTLISLIFAFQGFGTL 204
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 36.7 bits (81), Expect = 0.004
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +1
Query: 346 IPF-GILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLGEGPIVPCT 522
+PF GI+S+ G ++ L +++ +FG + AA+ WL++ R +QG+G G I+
Sbjct: 142 LPFCGIMSEVVGRKIVLYTSIVL-FLFGSAMCGAAQ-NMLWLVLCRAVQGIGGGGIMSLV 199
Query: 523 HAMLAKWVPPNERSRMGAAVYAGAQFGTVISM-PLSGLLSAYGFAGGWPSIFYVFGMIGT 699
++A P R + G +G M PL G A W IF++ G
Sbjct: 200 TIVIADITPLQTRPYYTGCM--GVTWGVASVMGPLIG--GAISQNTTWRWIFFINLPTGG 255
Query: 700 VWCLAFLFFVSEDPE 744
+ +FF++ P+
Sbjct: 256 LSLALLIFFLNLVPK 270
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 36.7 bits (81), Expect = 0.004
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 3/198 (1%)
Frame = +1
Query: 136 IMRTNMSVAIVAMVNHTALTVIAEEIDTECGPVNPNKTSVVSTQDGDYAWDSSLQGYILS 315
I NM + + A++ LT+ +D N T+ + T D+ D+S +I S
Sbjct: 90 IPENNMKIVVPALI----LTLFLAALD------NTIVTTALPTIAEDFN-DTSSSSWIGS 138
Query: 316 SFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGL 495
++ G+ G ++ L + + + L A WLIV R IQGL
Sbjct: 139 AYVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALC--GASQNMIWLIVCRAIQGL 196
Query: 496 GEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSIF 675
G G I+ + +++ P R M + + A A +++ P+ G A W IF
Sbjct: 197 GGGGIISLVNIIISDITPLRTRP-MYSGILATAWGAALVAGPIIG--GAICQRTTWRWIF 253
Query: 676 YV---FGMIGTVWCLAFL 720
++ G I T + FL
Sbjct: 254 FINLPSGGIATALIVVFL 271
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 36.3 bits (80), Expect = 0.005
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Frame = +1
Query: 310 LSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQ 489
+S F GY + I + +S+ G + L +G+ + SVF + V A + +++ RF
Sbjct: 180 VSLFMLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQD--IQTIMICRFFG 237
Query: 490 GLGEGPIVP-CTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWP 666
G G VP C A + PN ++A F + P+ G + GW
Sbjct: 238 GY--GACVPLCVVAAAFADMYPNRYRGTAITIFAAVIFVGPLVAPIVGGFLTKSYL-GWR 294
Query: 667 SIFYVFGMIGTVWCLAFLFFVSE 735
Y+ +G + + F E
Sbjct: 295 WTEYITSFMGFLSIILIYLFCEE 317
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 35.5 bits (78), Expect = 0.008
Identities = 32/138 (23%), Positives = 57/138 (41%)
Frame = +1
Query: 310 LSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQ 489
+S + G+ I + +S+ G ++ L VGM + S+F + V VA + +++ RF
Sbjct: 139 MSLYVCGFASGPILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDV--QTVMICRFFS 196
Query: 490 GLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPS 669
G + A A N+ ++A F + P++G A + GW
Sbjct: 197 GFCASSPLSVVAAAFADMF-DNKTRGPAVCIFACITFAGPLIGPIAGGFLAKSYL-GWRW 254
Query: 670 IFYVFGMIGTVWCLAFLF 723
Y+ +G L LF
Sbjct: 255 TEYITSFMGFFSTLCLLF 272
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 35.1 bits (77), Expect = 0.011
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Frame = +1
Query: 310 LSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPV--AAEAGYGWLIVVRF 483
L+ F+ GY+I ++P ++ R+++ L V G V + +RF
Sbjct: 133 LALFYVGYIIFEVPSNLMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRF 192
Query: 484 IQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQF-GTVISMPLSGLLSAYGFAG- 657
G+ E + P +++W + Y AQ +S+ +G G G
Sbjct: 193 FLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGFQKMDGARGL 252
Query: 658 -GWPSIFYVFGMIGTVWCLA 714
G+ +F ++G++ L+
Sbjct: 253 YGYQWMFLIWGVVAIAQALS 272
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 34.7 bits (76), Expect = 0.015
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 277 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG 456
Y+ S+ QG + G + I ++ RFG RL + +G + G++V V A
Sbjct: 55 YSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSI-IGFCAVYIIGIIVQVTAVPS 113
Query: 457 YGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNER 561
+ ++V + G+G G + ++ PP+ R
Sbjct: 114 WVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIR 148
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 32.7 bits (71), Expect = 0.059
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +1
Query: 319 FFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGW-LIVVRFIQGL 495
F G+ +PF LS +G + +L+ ++F + A W L+++RF QG
Sbjct: 144 FLVGFGFGSLPFAPLSGIYGRFVVYFCTLLMFTLFQIGGGCAQNI---WTLVILRFFQGF 200
Query: 496 -GEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSI 672
G P+ C L+ P +R+ + G + P+ G + G W +
Sbjct: 201 FGSTPLSNCG-GTLSDLFTPIQRTYVLPGFCTFPFLGPIFG-PIIGDFICQSYLG-WCWV 257
Query: 673 FYVFGMIGTVWCLAFLFFVSE 735
F++ ++G V + FF+ E
Sbjct: 258 FWINMIMGAVVIVIIFFFMPE 278
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 32.7 bits (71), Expect = 0.059
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +1
Query: 352 FGILSKRFGARL--FLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLGE--GPIVPC 519
+G + +G RL F+ V L+ LL A +++ ++GLG +V
Sbjct: 207 YGTMGDIYGRRLVLFITVSFLLLGDLWLLYQSYAPKHPYFVLFAAALKGLGGYISTVVAS 266
Query: 520 THAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSIFYVFGMIGT 699
++ +A R+ +A GT + LSG + Y P ++YVF + T
Sbjct: 267 QNSFVADCSKTEFRAWYLGLNFAAYHLGTALGPSLSGFIVQYT-----PHMYYVFYITST 321
Query: 700 VWCLAFLF 723
W + L+
Sbjct: 322 FWIIYLLY 329
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 32.3 bits (70), Expect = 0.078
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Frame = +1
Query: 310 LSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQ 489
++ F GY+ I + LS+ G +L L +GM +F + V VA + +++ RF
Sbjct: 176 MTVFLCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKD--IQTIMMCRFFS 233
Query: 490 GLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQF-GTVISMPLSGLLSAYGFAGGWP 666
G + A A + N+ ++A F G ++S + G L+ GW
Sbjct: 234 GFFASAPLTVVAAAFAD-MYSNKHRGTAITIFAALVFDGPLVSPIIGGFLTKSYL--GWR 290
Query: 667 SIFYVFGMIGTVWCLAFLFFVSE 735
Y+ +G + F E
Sbjct: 291 WTEYITSFMGFFALVIVYLFCDE 313
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 29.5 bits (63), Expect = 0.55
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Frame = +1
Query: 322 FYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGW----------LI 471
+ G ++ Q+ FG S RFG + GM+ ++ ++ YG+ LI
Sbjct: 125 YVGTIVGQLSFGWYSDRFGRKN----GMITATIILIVSTALCTGAYGYKGSINGMLSALI 180
Query: 472 VVRFIQGLGEGPIVPC 519
RF G+G G PC
Sbjct: 181 AYRFFLGIGIGAEYPC 196
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 29.5 bits (63), Expect = 0.55
Identities = 21/95 (22%), Positives = 41/95 (43%)
Frame = +1
Query: 277 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG 456
Y++ S+ QG I G + + R G R + +G + + G+++ V A
Sbjct: 51 YSYSSARQGLITGMVNVGSFFGCLISSPTTDRIGKRNSI-IGFCVIYLIGVIIQVTAVPS 109
Query: 457 YGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNER 561
+ ++V + GLG G + ++ PP+ R
Sbjct: 110 WVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIR 144
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 2.2
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +1
Query: 307 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYG----WLIV 474
+L+ + + P G L+ +F R V MLI +F L A +G LIV
Sbjct: 60 LLAVYAVANIAASSPIGFLADKFLTRK---VPMLIGLIF--LTSATALLTFGNSVPMLIV 114
Query: 475 VRFIQGLGEGPIVPCTHAMLAKWV-PPNERSRMGAAVYAGAQFGTVISMPLSGLL 636
R +QGL + A+L V N S MG ++ G +I+ G++
Sbjct: 115 ARVLQGLSAAVVWTVGLALLVDVVGADNVGSTMG-GIFGFISLGEIIAPVFGGIV 168
>SPBC342.06c |rtt109|kat11|RTT109 family histone lysine
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 369
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 159 DRHVRPHDVSVCHSEKQHERNPVPSSKPAYHTNIIQ 52
D H + + + +C K+ +R SKPA NI+Q
Sbjct: 327 DFHYKRYKLDICGLAKRDDRKNHNHSKPATQANILQ 362
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 546 HPLG*HSVSARHDGPLSQPLYEPDDDEPSVPS 451
HP + ++ PLS PL++P + S+PS
Sbjct: 240 HPATAINAQSQSGNPLSNPLFQPSNVPQSIPS 271
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 84 NSALGYVHAVSRNGKRLHHEDEHVG 158
NS+LGY +++R+ K + + EH+G
Sbjct: 92 NSSLGYAPSITRSIKSISNNTEHLG 116
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 512 TMGPSPSPCMNLTTMSHPYPASAATGTSRPNTEFISIPTPRN 387
T P P+P L + P P + A P++E S+ TPR+
Sbjct: 1215 TAPPVPTPSAGLPPV--PVPTAKAPPVPAPSSEAPSVSTPRS 1254
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 531 HSVSARHDGPLSQPLYEPDDDEPSVPSFGGDRH*QTEHRVYQHTHSEE-QASPEP 370
H V R PLS P +P D S P GG +H+V Q + +E +PEP
Sbjct: 204 HGVLHRLPAPLSGPPPQPGDIVFSNPMLGG-----PDHKVSQPSETENFLPTPEP 253
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 2.9
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = -3
Query: 740 GSSDTKNRNARHQTVP--IMPNT*KIEGQPPAKPYADSRPDSGIDITVPN*APAYTAAPI 567
GS T + A + P +MP ++ P D P + P Y P
Sbjct: 70 GSLKTSSLLASDEVFPSSVMPQLRPLDSSLSVSPEMDGWPWHHNSSSNPQ---GYAWTPS 126
Query: 566 LLLSFGGTHLASIA*VHGTMGPSPSPCMNLTTMSHPYPASAATGT 432
LL S ++L S + HG PSP +L ++ P+ ++TG+
Sbjct: 127 LLSSNATSYLHSGSSPHGNTSNHPSPISSLESL----PSRSSTGS 167
>SPAC1142.05 |ctr5||copper transporter complex subunit Ctr5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 173
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 559 RSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSIF 675
R+ M ++ Y A +I M +G +GF G W F
Sbjct: 115 RAAMYSSFYLSATILMLIVMSFNGYAILFGFVGAWIGFF 153
>SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 684 EHVEDRGPAAGEAIRRQQTGQRHRYNRTELSTG 586
+HV GP+ GE RQ G R N+ E S G
Sbjct: 77 DHVIWLGPSIGEMWFRQLPGDSDRPNKNENSAG 109
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 250 SVVSTQDGDYAWDSSLQGYILSSF 321
S V+TQD D W SS+ Y L+ F
Sbjct: 159 SGVATQDLDVQWVSSISWYFLNLF 182
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 553 NERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSIFYVFGMIGTVWCL 711
N+ + +G + Y G V S+PLS LL + + + +G++ T+ CL
Sbjct: 87 NQYNWVGTSFYLGFM---VFSLPLSTLLQKFPLSKVTSAFIVAWGILMTLTCL 136
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -2
Query: 153 HVRPHDVSVCHSEKQHERNPVPSSKPAYHT 64
++ PH + +C S + P P++ HT
Sbjct: 144 YITPHVIRICKSVSRQNAAPAPTASSFAHT 173
>SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 9.0
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 YGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLL 636
+GWLI + F+Q + G A L +P + AAV A +G + L+G
Sbjct: 78 WGWLIAMVFVQCVANG------MAELCSSMPTSGGLYYAAAVLAPKGWGPFAAW-LTGWS 130
Query: 637 SAYGFAGGWPSIFYVF-GMIGTV 702
+ G PS+ Y F GMI T+
Sbjct: 131 NYLVQVTGPPSVAYSFAGMILTL 153
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 84 NSALGYVHAVSRNGKRLHHEDEHVGRHRCYGQPHSSYCH 200
+S + + S NG L H+ E + + Y + H +YCH
Sbjct: 12 SSLVSSKNMTSENG--LEHQFEELLVEKQYSEEHCAYCH 48
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 660 AAGEAIRRQQTGQRHRYNRTELSTGIY 580
+AG+ I+ Q TG H +++ +TG Y
Sbjct: 634 SAGQTIQAQATGNTHNPFQSQQATGYY 660
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,343,035
Number of Sequences: 5004
Number of extensions: 74452
Number of successful extensions: 272
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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