BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i13
(766 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 27 0.63
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 25 3.4
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 25 3.4
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 24 5.9
AY062190-1|AAL58551.1| 151|Anopheles gambiae cytochrome P450 CY... 24 5.9
AY045760-4|AAK84945.1| 165|Anopheles gambiae D7-related 4 prote... 24 5.9
AJ302659-1|CAC35524.1| 165|Anopheles gambiae D7r4 protein protein. 24 5.9
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 27.1 bits (57), Expect = 0.63
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 661 WPSIFYVFGMIGTVWCLAFL 720
W + F+ + MIG VW ++FL
Sbjct: 219 WQTQFHAYKMIGLVWTVSFL 238
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 24.6 bits (51), Expect = 3.4
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -2
Query: 429 QTEHRVYQHTHSEEQAS---PEPLRQNPERNLCDDI 331
QT H+ QH S +Q S P Q P R+ D+
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQHQQPSRSASIDL 286
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 24.6 bits (51), Expect = 3.4
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 165 RCYGQPHSSYCHR-*RDRH 218
RC+G+ SS CHR D+H
Sbjct: 226 RCHGKDRSSKCHRCAEDKH 244
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 23.8 bits (49), Expect = 5.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 226 GPVNPNKTSVVSTQDGDYAWDSSLQG 303
GPVNP T+++S D D +G
Sbjct: 1151 GPVNPQTTALLSASSTDSDEDDEEEG 1176
>AY062190-1|AAL58551.1| 151|Anopheles gambiae cytochrome P450
CYP4H15 protein.
Length = 151
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 399 HSEEQASPEPLRQNPERNLCDDIAVEKRR 313
H++ + PEP R +PER + A EKR+
Sbjct: 108 HNDPELYPEPARFDPER--FSEEASEKRQ 134
>AY045760-4|AAK84945.1| 165|Anopheles gambiae D7-related 4 protein
protein.
Length = 165
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -3
Query: 116 RNSMNVTQC-----RVPSPLIIQISYNCLNKSTTYDTLRWV 9
R+ +N+ +C +VP+ + Y CL KSTT T + V
Sbjct: 90 RHDVNLEKCIGECVQVPTSERAHVFYKCLLKSTTGRTFKKV 130
>AJ302659-1|CAC35524.1| 165|Anopheles gambiae D7r4 protein protein.
Length = 165
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -3
Query: 116 RNSMNVTQC-----RVPSPLIIQISYNCLNKSTTYDTLRWV 9
R+ +N+ +C +VP+ + Y CL KSTT T + V
Sbjct: 90 RHDVNLEKCIGECVQVPTSERAHVFYKCLLKSTTGRTFKKV 130
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,850
Number of Sequences: 2352
Number of extensions: 21657
Number of successful extensions: 117
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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