Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2i08
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023088-1|AAY55504.1|  882|Drosophila melanogaster IP03817p pro...    29   6.5  
BT023069-1|AAY55485.1|  882|Drosophila melanogaster IP03917p pro...    29   6.5  
AE014134-807|AAF50958.1|  846|Drosophila melanogaster CG15624-PA...    29   6.5  

>BT023088-1|AAY55504.1|  882|Drosophila melanogaster IP03817p
           protein.
          Length = 882

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 397 EDEPRDGYEEIVNKFEKNIEEECDVENILETAAKHGHFIDIKVEPAEEEDTWSQI 561
           +DE  DGYEE+  K    I++E        ++     F+DIK  P +E  T  ++
Sbjct: 120 DDEDEDGYEEVDMKNVSRIQDEPG------SSFAGSDFLDIKNRPGDENATDDEV 168


>BT023069-1|AAY55485.1|  882|Drosophila melanogaster IP03917p
           protein.
          Length = 882

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 397 EDEPRDGYEEIVNKFEKNIEEECDVENILETAAKHGHFIDIKVEPAEEEDTWSQI 561
           +DE  DGYEE+  K    I++E        ++     F+DIK  P +E  T  ++
Sbjct: 120 DDEDEDGYEEVDMKNVSRIQDEPG------SSFAGSDFLDIKNRPGDENATDDEV 168


>AE014134-807|AAF50958.1|  846|Drosophila melanogaster CG15624-PA,
           isoform A protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 397 EDEPRDGYEEIVNKFEKNIEEECDVENILETAAKHGHFIDIKVEPAEEEDTWSQI 561
           +DE  DGYEE+  K    I++E        ++     F+DIK  P +E  T  ++
Sbjct: 84  DDEDEDGYEEVDMKNVSRIQDEPG------SSFAGSDFLDIKNRPGDENATDDEV 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,496,529
Number of Sequences: 53049
Number of extensions: 538526
Number of successful extensions: 1500
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)