Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2i08
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    32   0.37 
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho...    31   0.86 
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho...    31   0.86 
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh...    31   0.86 
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p...    31   0.86 
AC006712-1|AAK39323.1|  288|Caenorhabditis elegans Hypothetical ...    31   0.86 
Z68106-1|CAA92124.1|  516|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AF016420-4|AAB65308.1|  703|Caenorhabditis elegans Na/ca exchang...    28   4.6  
Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC006672-1|AAK84544.1|  305|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z37140-7|CAA85497.2|  452|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical
           protein ZK1037.1 protein.
          Length = 370

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = -1

Query: 474 LNITLLFYIFFKFIYNLFVPVSGFIFNDNQDHVVFSFN---ISFVHFYCVKFEHVLNLA 307
           +N+T   +   K IY      S FI +    HVVFS N   IS    YC +FEHVLN++
Sbjct: 304 VNLTNFLFPSLKRIYPTSTVYSKFIAH----HVVFSNNNKIISTDPIYCDQFEHVLNVS 358


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +1

Query: 397 EDEPRDGYEEIVNKFEKNIE-EECDVENILETAAKHGHFIDIKVEPAEEE 543
           +D+  DG EE ++  EK +E EE   EN+   AA++G   D + E +E E
Sbjct: 564 DDDEEDGDEEEMDSREKVVEIEEKPEENVENGAAENGEIGDDEEENSESE 613


>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
            6-phosphate synthaseprotein 1, isoform b protein.
          Length = 1294

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 24/100 (24%), Positives = 50/100 (50%)
 Frame = +1

Query: 298  VSECQVKYVFKFYTIKMDEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEEECDVEN 477
            +S+C+VK + +FY +    A ++ +  +V  +++  P      I   F  ++E   + +N
Sbjct: 835  ISQCEVKQLGQFYGLMSRTAQVRRQ--IVECVLKGLP------IRPHFRYSLE---NAKN 883

Query: 478  ILETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTENE 597
             LE++ K G  + ++ +    E+   +I YD  D  +E E
Sbjct: 884  SLESSCKSGTKLSLEADEESGEEKGFEITYDIHDELSEME 923


>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
            6-phosphate synthaseprotein 1, isoform a protein.
          Length = 1331

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 24/100 (24%), Positives = 50/100 (50%)
 Frame = +1

Query: 298  VSECQVKYVFKFYTIKMDEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEEECDVEN 477
            +S+C+VK + +FY +    A ++ +  +V  +++  P      I   F  ++E   + +N
Sbjct: 872  ISQCEVKQLGQFYGLMSRTAQVRRQ--IVECVLKGLP------IRPHFRYSLE---NAKN 920

Query: 478  ILETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTENE 597
             LE++ K G  + ++ +    E+   +I YD  D  +E E
Sbjct: 921  SLESSCKSGTKLSLEADEESGEEKGFEITYDIHDELSEME 960


>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative trehalose
            6-phosphatesynthase protein.
          Length = 1331

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 24/100 (24%), Positives = 50/100 (50%)
 Frame = +1

Query: 298  VSECQVKYVFKFYTIKMDEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEEECDVEN 477
            +S+C+VK + +FY +    A ++ +  +V  +++  P      I   F  ++E   + +N
Sbjct: 872  ISQCEVKQLGQFYGLMSRTAQVRRQ--IVECVLKGLP------IRPHFRYSLE---NAKN 920

Query: 478  ILETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTENE 597
             LE++ K G  + ++ +    E+   +I YD  D  +E E
Sbjct: 921  SLESSCKSGTKLSLEADEESGEEKGFEITYDIHDELSEME 960


>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
            trehalose-6-phosphate synthase protein.
          Length = 1331

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 24/100 (24%), Positives = 50/100 (50%)
 Frame = +1

Query: 298  VSECQVKYVFKFYTIKMDEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEEECDVEN 477
            +S+C+VK + +FY +    A ++ +  +V  +++  P      I   F  ++E   + +N
Sbjct: 872  ISQCEVKQLGQFYGLMSRTAQVRRQ--IVECVLKGLP------IRPHFRYSLE---NAKN 920

Query: 478  ILETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTENE 597
             LE++ K G  + ++ +    E+   +I YD  D  +E E
Sbjct: 921  SLESSCKSGTKLSLEADEESGEEKGFEITYDIHDELSEME 960


>AC006712-1|AAK39323.1|  288|Caenorhabditis elegans Hypothetical
           protein Y119C1B.4 protein.
          Length = 288

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +1

Query: 241 NNFTVLVEPQKH**QNKITVSECQVKYVFKFYTIKMDEADIKTEDDMVLVIVEDEPRDGY 420
           + F   +EPQ H     I V+EC+VK     +T + + A ++  +D          R  +
Sbjct: 172 STFDFHMEPQAHPAGTPIPVNECKVKLKTPPWTRRWEVASVRGIEDTWTQATPWFKRKLH 231

Query: 421 EEIVNKFEK 447
           + IVN +EK
Sbjct: 232 KTIVNDYEK 240


>Z68106-1|CAA92124.1|  516|Caenorhabditis elegans Hypothetical
           protein F41E7.1 protein.
          Length = 516

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 20/90 (22%), Positives = 38/90 (42%)
 Frame = -1

Query: 603 IILIFSFYITVVIINLTPCVLLFRRFNFNVDEMTVFRCSF*NILNITLLFYIFFKFIYNL 424
           I  + S +  ++++ ++P V +    NF   ++   +    NIL I  +  +F      L
Sbjct: 176 ISFVMSIFCALILVTVSPAVTVPAMINFKEKQLGSLKRIPENILAICCVDNLFCVI---L 232

Query: 423 FVPVSGFIFNDNQDHVVFSFNISFVHFYCV 334
           F+ +S  IF D         N   + F C+
Sbjct: 233 FMVLSSIIFTDAPIATTILLNAGSIVFGCI 262


>Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical
           protein T26H5.3 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 462 LLFYIFFKFIYNLFVPVSGFIFNDNQDHVVFSFNISFVHF--YCVKFEHVL 316
           L FY+   FI  +   V  F+  +N+ H++F  N  + HF  Y + F +++
Sbjct: 92  LFFYLGVTFITGVTTAV--FVTFENRFHILFGQNSKWRHFRKYAIVFSYII 140


>AF016420-4|AAB65308.1|  703|Caenorhabditis elegans Na/ca exchangers
           protein 8 protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 378 VVFSFNISFVHFYCVKFEHVLNLAFGHSNFVLLLMLLGFH 259
           +V +F   F+  + V++ H + L F   NFV+ + L  FH
Sbjct: 659 LVTTFVALFIERFTVRWPHAVALIFIFINFVIFVCLAEFH 698


>Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical
           protein C50B6.2 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +1

Query: 349 DEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEE---ECDVENILETAAKHGHFI-- 513
           + A+IK + +  L +  +EP    +E V   +K  EE   E DVEN  E   +    +  
Sbjct: 232 ERAEIKQKVEEALGVASEEPETVADEAVKTEQKEAEEDSVEKDVENSDEQNQEEEEVVEN 291

Query: 514 DIKVEPAEE 540
           +  V+P E+
Sbjct: 292 EATVDPTED 300


>AC006672-1|AAK84544.1|  305|Caenorhabditis elegans Hypothetical
           protein K08D12.5 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 444 FKFIYNLFVPVSGFIFNDNQDHVVFSFNISF 352
           + F ++L   V G IFN+  D   F F +SF
Sbjct: 22  YAFKFHLSTLVDGIIFNNEDDPTPFDFALSF 52


>Z37140-7|CAA85497.2|  452|Caenorhabditis elegans Hypothetical
           protein ZK899.4 protein.
          Length = 452

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/64 (17%), Positives = 32/64 (50%)
 Frame = +1

Query: 412 DGYEEIVNKFEKNIEEECDVENILETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTE 591
           + +  + +KF+    +   V   +    + G F++ + + A  E  ++++  D  D++ E
Sbjct: 389 EAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTADLEEE 448

Query: 592 NEDY 603
           N+++
Sbjct: 449 NDEF 452


>AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical
           protein F08F1.3 protein.
          Length = 226

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 435 IYNLFVPVSGFIFNDNQDHVVFSFNISFVHF-YCVKFEHVLN 313
           I+ + + ++ F+ N +  HVVFS NI F+H    V F+++ N
Sbjct: 140 IFLIVIFIAKFV-NFSFKHVVFSSNIKFLHLKILVYFDNIRN 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,574,383
Number of Sequences: 27780
Number of extensions: 298142
Number of successful extensions: 1056
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)